Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04563 ATGGGCTGTAATATTTCAAAGCTTGAAAGACTCCCAGCAGTGTCTTTGTGCCGTGACCGTTCTACATTGATAGATGAATCACTCCATCAAAGCTATGTTCTTGCGGATGCACATCTCGCACACATGGAATCCCTCCGAACACTTGGCCCAGCTCTCCTCACTTTCTTCCATGATTATGGCGAAATCAATGCTTCCCTCTCGAAAACATCATCTCCATTGAGTTCACTTTTTTCTTCTGATTCTGAATCAGAAACACATGAATTAGAAAGAGAATCACAATTATGCACTCACCATAACACCGTGACTTTCATGAACTACATAAAACCTATTTATGATTCCTATTCTCCACCTCCTCCGAGTAACTCTGCTTGGGATTTCTTAAACTTCTTTGAACCTTATGACAAGTATCAAGTGCCTTTCTATAACGGTTACAATGATACTGACATAACGATTGAGAAAAGTGAGTGTTTTAAATCCAAAGGTGGAGGAGATAAAGCTATTATTAAGCGAGAAAAACATAAGGAAACCAAATTGAAAGAGGAGTTAGAAGAATGTAACGACTTTTCTAAAGGGATTTCTGAAGCTGTGAAAGAGATTCAGATTCTATTTGAGAGAGCTTCCAATTCGGGGAACAATATTTACGACATGCTAGACGTTGGAAAACTCCGTTACCATTCAAAAACTGAACGCGGTATAGTGTCGTGGAAGATTATGCAACTGATGAATAAATGTATGGAGGGTTCATTGCTTGGAGTTTGTGAACAAGACAAGGGCCTTAGCCATGGAAATCTATGCTCCTCTTTGAGTAAACTGTGTATGTGGGAGAAGAAGCTTTATCATGAAGTGAAGGCTGAGGAAAAAATGCGCACACTTCATGAAAAGAAGTATAAGCAGTTGAAATATATGATTGAAAAGGAAGCAGAGGCACAGAAAATTGATTCTGTCGAAGCTTTCATCGATATTTTAGTTAGGAACATGAAAATTTCTATGCAAGTAGTTGACAAGATATCTATTACTATCACTAAGTTGACAGAAGAAGAGCTATGGCCACAAATCAACATGTTTATTCTCATGTTTCTGAGAATGTGGAAAGATATGCAACAATGTTACAAACTTCAGTGTAAAAAAATCGTTGAAACAAAAGCTTTAGATGTCTCCGCATTCAACAGAAAACCTTGCAATGCTAATATTGAAGTAGCTATACAGCTCAAATCTGAGTTTCAGAAATGGATTTTAACCTTCTTAGATTGGACTAAAGCTCAGAAGTCTCTTGTGAAAGCTCTGAATGATTGGTTAGTAAGATGTCTAATGTATAAACCTGAAGAATTACTTGATGATTCAATTCCAGTTGATGCACCACATGTGTTTGTGAAATGTAACAAGTGGTCAAGGGCAATGGATAATATCTCAGAAAAGAATGTTATTCAAGCTATGAATGGATTCATACTCAGAGTAAATGAACCATTGGAAAAGCATATTTTGAAGCTTCAGAAGAATTCAACATTGGACAAGGAATTAGAGAGAAAAGTGAAAGTTGTGGAGAGGCAAGGGCAAAAGATGAAGAGAAAAGTGAAATTTATAGACAGGCAAGAGCAAAAGAAAAAGATGATTTCAATTGCAAAAGCACTTAAAGAAGAGACCAATGTTATGTTGCAAGGAGATGTTGTGAATAATAATGATGATATAGTTGATTCTACCGGGTTGCAATCAAGTTTGAAACAGATCTTTGTTGCGATGGAGAAGTTCAGTGCAACAAATGTTAACTTATATGAAGAACTTTGGCAACAAATTAAGCAAGATGATCATGTTTTAGGAGAATCCAACAAAAATCACTAG 1836 0.3655 MGCNISKLERLPAVSLCRDRSTLIDESLHQSYVLADAHLAHMESLRTLGPALLTFFHDYGEINASLSKTSSPLSSLFSSDSESETHELERESQLCTHHNTVTFMNYIKPIYDSYSPPPPSNSAWDFLNFFEPYDKYQVPFYNGYNDTDITIEKSECFKSKGGGDKAIIKREKHKETKLKEELEECNDFSKGISEAVKEIQILFERASNSGNNIYDMLDVGKLRYHSKTERGIVSWKIMQLMNKCMEGSLLGVCEQDKGLSHGNLCSSLSKLCMWEKKLYHEVKAEEKMRTLHEKKYKQLKYMIEKEAEAQKIDSVEAFIDILVRNMKISMQVVDKISITITKLTEEELWPQINMFILMFLRMWKDMQQCYKLQCKKIVETKALDVSAFNRKPCNANIEVAIQLKSEFQKWILTFLDWTKAQKSLVKALNDWLVRCLMYKPEELLDDSIPVDAPHVFVKCNKWSRAMDNISEKNVIQAMNGFILRVNEPLEKHILKLQKNSTLDKELERKVKVVERQGQKMKRKVKFIDRQEQKKKMISIAKALKEETNVMLQGDVVNNNDDIVDSTGLQSSLKQIFVAMEKFSATNVNLYEELWQQIKQDDHVLGESNKNH 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04563 611 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Vifa2g04563 611 Coils Coil 503 523 - -
Vifa2g04563 611 PANTHER UNCHARACTERIZED 1 595 - -
Vifa2g04563 611 Pfam Protein of unknown function (DUF632) 193 486 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04563 Vifa-Chr2 1342339080 1342341207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04563 195 597 Acyl Lipid Metabolism Gene Families AT2G27090 21.245 8.28e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04563 - - psat:127085884 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04563 2 1342339080 1342341207 Vifa2g04563 2 1342339080 1342341207 ECH