Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04561 ATGGAAGAAGTGGTGGAAGTAGAAATAATGAAAAAGCAGAATTCTCCATCAGTTTCAACTCCACCACAACTTCAAATACATTCTCCTAATTCAATGAGTTTTCCTAAAAGCCCTTTTGGTGCTCGTTTTATGAACACTCCTATAGCCAGTCCCATGAAAAAAGCCATTGAAAACATGTTTGTAGAAGTTGGTCAATTCACCAAATTTGACCCACAGGATGATTGGCTTCCAATCACTGCTTGTAGAGAAGGAAACGCTTATTATGCTGCGTTTCATGTTCTTTGTTCTGGAATTGGATTTCAAGCACTTGTTCTTCCCTTGGCCTTTACCACTCTTGGCTGGACTTGGGGAATTTTATGTCTATGTGTGGCTTTCACATGGCAATTATACACCTTATGGTTATTGATTCAGCTTCATGAATCAGACTTAGGGGTACGTCATAGCAGGTATCTTAAGCTTGCTATGGCAGCATTTGGAGAAAAGCTAGGAAAAATATTGGTACTTTTCCCAGTCCAGTATTTATCTGGTGGAACATGTGTGACACTGATTATGATTGGAGGTGGCACAATGAAGATATTGTTCCAGATTCTGTGTGGAGATTCATGCAGTTTATACCAACTCAAAACCATAGAGTGGTATTTGGTATTCACTGTGGCTGCCATTTTGCTTGCCCAGCTTCCAAATCTTAATTCATTTGCAGGGGTTTCTCTCATAGGAGCTATCACAGCAGTAGGTTATTGTTCTATAATATGGATTGTGTCTTTACTCCGAGGTAGGATTGATAATGTGTCATATGAGTCACCAAAGGGACAATCACAAGCTACTAGGATTTTTAGTGTGTTGAATGCACTTGGAATCATTGCTTTTGCTTTTAGAGGTCACAATCTTGTGCTGGAAATACAGGGAACCATACGTTCTGAGTCAAAGAATCCATCACGTTTGGCAATGTGGAAAGGGGTTATGTTTGCTTATCTAGTCATTGCCTTTTGTTTGTTTCCTTTAGCCATCGGAGGCTATTGGTCCTATGGAAATTTAATACCTTCAAATGGAGGAATGTTAAGTGCTTTGCAAAAATACCATGAAAACGAAACATCAAAGTTTATCATCGCTTTGACAAGTTTGCTGGTTGTCATCAACAGCCTCAGTTCTTTCCAAATTTACGCAATGCCGATACTTGACAATCTAGAATTCAGATATATCAGCAAAAGGAACAAACCTTGTCCGAGGCCGCTGCGAATAGTCTTCAGAAGTCTCTTCGGCTGCCTGACGTTTTTTATTTCCGTAGCATTACCGTTCTTACCAAGTTTAGCAGGTCTCATTGGAGGCATTGCTCTACCAATAACCTTAGCTTATCCTTGTTTCATGTGGATACTGATTAAGAAACCAAAAAGGTTTAGCACAAGTTGGTACCTAAACTCGACGCTTGGAGCAGTTGGGATGGTTCTAAGTGTACTGGTTGTAACAGGAGCCATTTGGGGCATGGTAGCACTGGGCATTCAGATCCACTTCTTCAATCCATAA 1521 0.403 MEEVVEVEIMKKQNSPSVSTPPQLQIHSPNSMSFPKSPFGARFMNTPIASPMKKAIENMFVEVGQFTKFDPQDDWLPITACREGNAYYAAFHVLCSGIGFQALVLPLAFTTLGWTWGILCLCVAFTWQLYTLWLLIQLHESDLGVRHSRYLKLAMAAFGEKLGKILVLFPVQYLSGGTCVTLIMIGGGTMKILFQILCGDSCSLYQLKTIEWYLVFTVAAILLAQLPNLNSFAGVSLIGAITAVGYCSIIWIVSLLRGRIDNVSYESPKGQSQATRIFSVLNALGIIAFAFRGHNLVLEIQGTIRSESKNPSRLAMWKGVMFAYLVIAFCLFPLAIGGYWSYGNLIPSNGGMLSALQKYHENETSKFIIALTSLLVVINSLSSFQIYAMPILDNLEFRYISKRNKPCPRPLRIVFRSLFGCLTFFISVALPFLPSLAGLIGGIALPITLAYPCFMWILIKKPKRFSTSWYLNSTLGAVGMVLSVLVVTGAIWGMVALGIQIHFFNP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04561 506 Pfam Transmembrane amino acid transporter protein 84 495 IPR013057 -
Vifa2g04561 506 PANTHER OS05G0424000 PROTEIN-RELATED 86 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04561 Vifa-Chr2 1341365348 1341370317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04561 1 506 Organic Solute Cotransporters AT1G47670 52.794 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04561 K26385 - gmx:100788860 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04561 2 1341365348 1341370317 Vifa2g04561 2 1341365348 1341370317 ECH