Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04558 ATGAAGCTCAGCTTAGAACTAGGAGTAACAACACTTCTTCTATGTGCTGCTATTTCTTTCTTCCACATTACTTCAGCTGAAGATCCATATAAATTCTTCAACTGGAATGTTACTTACGGTGACATTTACCCACTTGGAGTTCGCCAAACAGGTATATTGATCAATGGACAATTCCCTGGTCCAGACATTCATTCTGTTACAAACGACAATCTCATTATCAATGTCTTCAACAGTTTAGATGAACCCTTTCTCATATCCTGGAATGGGATCCAGCAGAGAAGGAATTCATTTGAGGATGGTGTATTTGGAACAACATGTCCAATTCCACCAGGGAAGAATTTCACTTACATACTTCAAGTGAAAGATCAAATTGGAAGTTTTTACTATTTTCCATCTCTTGCATTTCACAAAGCAGCTGGTGGTTTTGGAGGTATTAGGATACTGAGTAGGCCAAGAATTCCAGTTCCTTTTCCTGATCCCTCTGGTGATTACACTGTGCTTATTGGTGATTGGTACAAGTCCAACCATACGACTCTAAAAGCCCATCTTGATAATGGAAAGAAGCTTCCTATACCTGATGGAATCCTCATCAATGGTCGCGGCCCTAATGGATTATCTTTCAACGTCGAACAAGGAAAGACTTACAGGCTTAGGATATCAAATGTGGGATTACAACATTCCCTTAACTTTCGAATTCAGAATCACAAAATGAAGTTGGTAGAAGTTGAAGGGACACACACTCTTCAAACTACCTACTCCTCACTTGATGTTCATGTCGGACAATCCTATTCAGTGCTAGTAACTGCTGATCAACCTTCTCAAGACTACTACATTGTGGTTTCCACAAGATTCTCGGCGAAGATCCTCACTACTACTGGCGTACTTCGCTATAGTAACTCTGCAGGCCCGGTATCAGGCCCGCCTCCTGGTGGACCGACGATCCAAGTTGATTGGTCTTTGAACCAGGCCCGCTCAATCAGGACTAACCTTACAGCGAGTGGACCAAGGCCTAATCCCCAAGGATCCTACCATTACGGGCTCATAAACACGACCAAGACAATCATTCTGTCTAGTTCACCTGGTCAAGTTAACCGCAAGCAAAGATACGCGATTAATAGTGTATCATATGTTTCTCCAGACACACCTCTTAAGCTCGCTGACTACTTCAAAATTTCCGGCGTTTTTCGCGTTGGAAGCATATCGGATAGGCCCACTGGTGGTGGCATTTACCTTGATACATCTGTTTTGCAAGCCGATTACAGATCTTTCATTGAGATTGTCTTCCAAAACAACGAGAACATCGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACAGTGGACAACTTCTAGCAGAAACAATTACAATCTCCGAGACGCAGTCGCGCGATGCACCACTCAGGTATATCCTTATTCATGGACTGCTATTTATGTTGCTCTCGACAACGTTGGAATGTGGAACTTGAGGACTGAGTTTTGGGCGCGACAGTACCTTGGCCAACAGTTTTATTTGCGCGTTTACACAACATCAACTTCAATCAGAGATGAGTTTCCTATTCCAAAGAACGCGCGACTCTGTGGTCGGGCAAGTGGGCGTCATACACGACCCCTTTGA 1638 0.4347 MKLSLELGVTTLLLCAAISFFHITSAEDPYKFFNWNVTYGDIYPLGVRQTGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLISWNGIQQRRNSFEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPSGDYTVLIGDWYKSNHTTLKAHLDNGKKLPIPDGILINGRGPNGLSFNVEQGKTYRLRISNVGLQHSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPSQDYYIVVSTRFSAKILTTTGVLRYSNSAGPVSGPPPGGPTIQVDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILSSSPGQVNRKQRYAINSVSYVSPDTPLKLADYFKISGVFRVGSISDRPTGGGIYLDTSVLQADYRSFIEIVFQNNENIVQSYHLDGYSFFVVGMDGGQWTTSSRNNYNLRDAVARCTTQVYPYSWTAIYVALDNVGMWNLRTEFWARQYLGQQFYLRVYTTSTSIRDEFPIPKNARLCGRASGRHTRPL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04558 545 Pfam Multicopper oxidase 37 150 IPR011707 GO:0005507
Vifa2g04558 545 PANTHER MULTI-COPPER OXIDASE 49 510 IPR045087 -
Vifa2g04558 545 FunFam L-ascorbate oxidase homolog 30 151 - -
Vifa2g04558 545 Pfam Multicopper oxidase 163 299 IPR001117 -
Vifa2g04558 545 Pfam Multicopper oxidase 381 517 IPR011706 GO:0005507|GO:0016491
Vifa2g04558 545 Gene3D - 161 336 IPR008972 -
Vifa2g04558 545 Gene3D - 346 541 IPR008972 -
Vifa2g04558 545 Gene3D - 30 151 IPR008972 -
Vifa2g04558 545 CDD CuRO_3_AAO_like_1 379 499 IPR034275 GO:0005507
Vifa2g04558 545 SUPERFAMILY Cupredoxins 347 536 IPR008972 -
Vifa2g04558 545 SUPERFAMILY Cupredoxins 157 337 IPR008972 -
Vifa2g04558 545 SUPERFAMILY Cupredoxins 24 177 IPR008972 -
Vifa2g04558 545 CDD CuRO_1_AAO_like_1 31 147 IPR034273 GO:0005507
Vifa2g04558 545 FunFam Monocopper oxidase-like protein 161 335 - -
Vifa2g04558 545 FunFam Monocopper oxidase-like protein 347 544 - -
Vifa2g04558 545 CDD CuRO_2_AAO_like_1 162 297 IPR034271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04558 Vifa-Chr2 1341273110 1341276570 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04558 - - gmx:100776222 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04558 2 1341273110 1341276570 Vifa2g04558 2 1341273110 1341276570 ECH