Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04544 ATGGAGAAACTGAATTTGTATGGATTGAGCCATCTCTTCATGACTGTCTTCCTTCATAACTTATCGACATTCATGGTGGTGCCGGCGATCACCGATGTCACAATGGCTGCGCTTTGCCCCGGACAAGATGAATGCTCACTTGCAATCTACCTCACTGGTTTTCAACAAGCGATGATAGGAGTGGGAACTCTTGTGATGATGCCAATCTTGGGCAGTCTCTCAGACAAATATGGAAGAAAAAGTATTCTCACACTTCCAATGACCCTCATGATCATTCCCTTAGGCATATTAGCTTACAGTAGAACCAAAACATTCTTCTACATTTACTACGTGTTTAAGATCATAATTTTCATGATTTGTGATGGATGTATCCCTTGCCTCGCTCTAGCTTACGTTGCAGATAATGTTCCAGAAGGTGGAAGAAGCACTGCGTTTGGAATTCTTTCAGGAATAGGTTCTGCTGCGTTCGTATGTGGGACCCTCGCAGCTCGTTTTTTATCTGCTGCTCAAACTTTTCAGGTTTCTACTTTTGTTGCGGTGCTTGGAGCAGTTTACATGCAAATTTTCCTTCGAGATTCAGTCATCGATCACAATGATCTTTATGCCCCAATCATTTCACATGGAAAATCCAAAGCCAATGTTCCGTTGTTGAAAGCATTGCGTTCTTTGCAGGATTTAACCTCCTTCCTGAATAGTAGCAAGACTATCAACCAAGCAGCAATTGTTGCATTCTTCAGCAACCTTGCAGATGTTGGACTTCATGGTTCAATGATGTTTTACTTAAAGGCTCGGTTTCATTTTGATAAGAATCACTTTGCTGACTTAATGATCATTTCCGGTATTGCAGGGACTGTGTCACAGCTTTTACTTATGCCTATTTTTGTTCCTACTTTGGGTGAGGCAAGGCTTCTTTCGATTGGACTGTTTTTTCACTGTGTACATATGATCATTTACAGCATAGCATGGTCCGCCTGGGTTCCCTATGCAGCTGCAATGTTCTCAATATTGTTTGTTTTTTCACAACCTTGTATACGAAGTATTGTGTCGAAACAAGTTGATCCCCATGAGCAGGGAAGGGCTCAAGGTTGCATCTCAGGCATATGTTCAATTGCACATATTGTTTCTCCCTTGGCTTTCTCTCCATTAACAGCTCTCTTTTTATCTGAGAAGGCGCCTTTTGATTTTCCCGGTTTCAGTATAATGTGTATTGGAATTGCTTCGATGATATCTTTTGTTCAGAGTATGATGCTTAGAGTGGTTCCTCCCATTTTGAGTTAG 1278 0.4147 MEKLNLYGLSHLFMTVFLHNLSTFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAMIGVGTLVMMPILGSLSDKYGRKSILTLPMTLMIIPLGILAYSRTKTFFYIYYVFKIIIFMICDGCIPCLALAYVADNVPEGGRSTAFGILSGIGSAAFVCGTLAARFLSAAQTFQVSTFVAVLGAVYMQIFLRDSVIDHNDLYAPIISHGKSKANVPLLKALRSLQDLTSFLNSSKTINQAAIVAFFSNLADVGLHGSMMFYLKARFHFDKNHFADLMIISGIAGTVSQLLLMPIFVPTLGEARLLSIGLFFHCVHMIIYSIAWSAWVPYAAAMFSILFVFSQPCIRSIVSKQVDPHEQGRAQGCISGICSIAHIVSPLAFSPLTALFLSEKAPFDFPGFSIMCIGIASMISFVQSMMLRVVPPILS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04544 425 Gene3D MFS general substrate transporter like domains 9 422 IPR036259 -
Vifa2g04544 425 SUPERFAMILY MFS general substrate transporter 12 409 IPR036259 -
Vifa2g04544 425 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 9 406 - -
Vifa2g04544 425 CDD MFS_SLC46_TetA_like 12 416 - -
Vifa2g04544 425 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 194 IPR020846 GO:0022857
Vifa2g04544 425 Pfam Major Facilitator Superfamily 12 376 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04544 Vifa-Chr2 1336363104 1336369620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04544 8 421 Organic Solute Cotransporters AT2G16990 45.287 2.50e-118 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04544 - - mtr:11436685 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04544 2 1336363104 1336369620 Vifa2g04544 2 1336363104 1336369620 ECH