Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04539 ATGGCGAAATCAAAATCTCAGTTCCTTCAGACGCAAAACTCTGAAAGTTTGGCGGAAAGGAAGGAGCAGTGGACTGAGATTCTTTCTTGGGAGCCGAGAGCTTTCATCTATCACAATTTTCTGTCAAAAGAAGAGTGTGAGTACATGATCAATCTTGCCAAGCCTTTCATGGAAAAATCAAGTGTTGTTGATAGTAAGACTGGAAAGAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTTTTGAAGAGAGGAAAGGACAAAACTATCCAGAATATTGAAAAAAGGATTGCGGACTTTACCTTTATACCAGTAGAGAATGGAGAAGGACTTCAGGTTCTTCACTATGGAGTTGGGGAGAAATATGAGCCTCATTACGATTACTTTCTTGATGAGTTCAACACTAAGAATGGAGGCCAACGAGTTGCTACAGTTCTTATGTCTGACGTTGAAGAAGGTGGTGAGACTGTATTTCCTGCTGCTAAGGCCAACTTTAGCGCTGTGCCATGGTGGAATGATTTATCTGAATGTGCTAGAAAGGGTCTATCAGTGAAACCAAAAATGGGTGATGCTCTGCTGTTTTGGAGCATGAGGCCAGATGCCTCACTAGATGCATCTAGTTTACATGGTGGTTGCCCAGTAATTAGAGGAAATAAATGGTCTTCAACTAAGTGGATGCATCTTGAGGAGTACAAAGTTTAA 705 0.4142 MAKSKSQFLQTQNSESLAERKEQWTEILSWEPRAFIYHNFLSKEECEYMINLAKPFMEKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKTIQNIEKRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMSDVEEGGETVFPAAKANFSAVPWWNDLSECARKGLSVKPKMGDALLFWSMRPDASLDASSLHGGCPVIRGNKWSSTKWMHLEEYKV 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04539 234 Gene3D q2cbj1_9rhob like domain 25 229 - -
Vifa2g04539 234 SMART p4hc 32 228 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vifa2g04539 234 Pfam 2OG-Fe(II) oxygenase superfamily 112 228 IPR044862 -
Vifa2g04539 234 FunFam Prolyl 4-hydroxylase 4 24 229 - -
Vifa2g04539 234 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 108 229 IPR005123 -
Vifa2g04539 234 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 17 229 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04539 Vifa-Chr2 1334163977 1334166976 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04539 K00472 - gmx:100818586 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04539 2 1334163977 1334166976 Vifa2g04539 2 1334163977 1334166976 ECH