Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04535 ATGAAGATGGAGATGAAGGATGGAACTGAAACTGTGGTGGTTAATAATGGTAACTTTCTGGAAGAAGAAGAAGAACTCTCAAGCTGTAAATTCTCGCATCTTCTTGCTTCCAAGGATCGTGATTTTCTTCTATCACCAACTGGAGCTCAGGTAAAAGTTTCGGAACTTGAAGGAAAAGTAGTGGGACTATTATTCGCTGCCAACTGGTACCCACCATGTCGAGGATTCACGCAATTGCTCATTGGAATATACCAACAACTCAAAACAAACATCCCTCACTTTGAAATAGTTTATGTATCTTCTGATGAGGACTTAGATGCTTTTAATGGATTCTACCAAACCCATGCCATGGCTTGCATAATGGCGAAGCCACACTCCCGGGATGGTGTTGAGCTTATTTATCGATATGGTGTTCAAGCTTTTCCGTTTAGTAAAGAGAGGTTGGAGGAATTGCATGAGGCTGAGAGAGAGAAGCTTGAGAATCAGACTCTAGCTAATTTGCTGGCTAATAATTATAGAGATTATGTTTTGAGTCACACAAGTGGATTACTCACTCAGGTACCTGTTGCTTCTTTAGTAGGCAAAACTATTGGACTATATTTCTCAGCTGGATGGTGTGTCCCATGCACCAAATTCACTCCCAAATTGATATCTGTTTATCAGAAAATCAAGCAAGAGATAGCTGAAAAAGAAGATAATGAAGAAGGTTTTGAAATTGTGCTTGTATCGAACGATCGCGACCAAGAATCTTTCGACTCTTACTACAACACCATGCCTTGGTTAGCATTACCTTTTGGTGACCCGGAGATAAAGAACCTTGCAAGACATTTTGATATACAAGGGATACCTTGTTTGCTAGAGAAACAGCTTGAAGAGGAGGCTAAGGATCTACCAAATTTGGTGCATCATGAAGGGCACCATCATGGACTTAATTTAGTGTCTGATGGAAATGGTGGAGGGCCCTTTATTTGTTGTGTTTGTGATGAACAAGGGTCTAATTGGGCTTACCAGTGTCTTCAATGTGGCTATGAAGTGCATCCAAAGTGTGTCACAACTGTGCATGGATCATGA 1071 0.409 MKMEMKDGTETVVVNNGNFLEEEEELSSCKFSHLLASKDRDFLLSPTGAQVKVSELEGKVVGLLFAANWYPPCRGFTQLLIGIYQQLKTNIPHFEIVYVSSDEDLDAFNGFYQTHAMACIMAKPHSRDGVELIYRYGVQAFPFSKERLEELHEAEREKLENQTLANLLANNYRDYVLSHTSGLLTQVPVASLVGKTIGLYFSAGWCVPCTKFTPKLISVYQKIKQEIAEKEDNEEGFEIVLVSNDRDQESFDSYYNTMPWLALPFGDPEIKNLARHFDIQGIPCLLEKQLEEEAKDLPNLVHHEGHHHGLNLVSDGNGGGPFICCVCDEQGSNWAYQCLQCGYEVHPKCVTTVHGS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04535 356 Coils Coil 145 165 - -
Vifa2g04535 356 PANTHER THIOREDOXIN 23 119 - -
Vifa2g04535 356 Pfam C1 domain 305 350 IPR004146 -
Vifa2g04535 356 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 305 356 IPR002219 -
Vifa2g04535 356 Gene3D Glutaredoxin 34 145 - -
Vifa2g04535 356 SUPERFAMILY Thioredoxin-like 44 143 IPR036249 -
Vifa2g04535 356 Gene3D Glutaredoxin 177 289 - -
Vifa2g04535 356 SUPERFAMILY Thioredoxin-like 183 286 IPR036249 -
Vifa2g04535 356 CDD C1 324 354 - -
Vifa2g04535 356 ProSiteProfiles Thioredoxin domain profile. 134 299 IPR013766 -
Vifa2g04535 356 SUPERFAMILY Cysteine-rich domain 293 351 IPR046349 -
Vifa2g04535 356 Pfam Thioredoxin-like 194 285 IPR012336 -
Vifa2g04535 356 Pfam Thioredoxin-like 58 142 IPR012336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04535 Vifa-Chr2 1333516336 1333519069 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04535 K17609 - gmx:100815038 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04535 2 1333516336 1333519069 Vifa2g04535 2 1333516336 1333519069 ECH