Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04505 ATGGGGGCGGTTTGTTCGGCTGGGATGGCTGGGGAAAATGCCGAGTTTGGAGGGAAGACTTTGGGGTTTTCTGGGAAGATTCTTAAGAAGGGAGATAGTTTTACGAATCGGAAAGATTCTGATTCAAGGTCTACTGATCAGGGCAAAAACCTAAGGAATAAGGAAAATGGGTTTTCGGATGACTTTGGTTTATCCACTTCAGCTTCCATGGGGGAAAAACAGATCAGCAGGAAGGGCTCTTTACTGAGCAAAGCTAGCTATAGGGCAGTGGAAGTTCTGGACAGTCTTGGAAGTGGCATGCCAAAGCTAAATAACAGTAGTGGGTTTGTCTCTGGCATGAATTCTAAAGGGAAGAAAATATCAATATTGGCTTTTGAAGTAGCTAATACGATAACCAAAGGTGCCATTTTATTTCACTCACTTTATGAAGAAAACATTCAGTTCCTCAAGAAGGAGGTTTTACAATCCGAAGGCATTCAGCAATTAGTCTCGACAGATATGAAAGAGTTAATAAGTCTTGCTGAGATGGACAAAAGGGAAGAATTCAATGTCTTCTCACGGGAAGTAGCTAGGTTTGGAAACATGTGTAAAGACCCACAGTGGCATAACCTACATCGATATTTCTCAAGATTAGACATGGATGTCTTGGGCGACAAACAAAATCAGGTAGATGCCGAAAAGACAATGCAGGAGTTTGCCGGTCTAGTTAATTATACTGCGGAATTATACCATGAATTAAATGCTTACGAACGCTTTCAACACGATTATCAACAAAAAATTAAGGAAATGGAGTCCTTGAATCTTCCTCTGAAAGGTGAGAGTATCACAATTTTTCAAAGTGAGTTAAAGCATCAAAAAAAGCTTGTGAGGAACTTGAAAAAGAAGTCTCTTTGGGCCAGAAATTTGGAGGAGATAGTTGAGAAACTTGTAGATATTGTTACCTATATACATCAAGCAATTTGCGAGCTCCTTGGAAATCACGGTACTGGTGCTGTCAAGTATGGTAAAGGTCCTCAAAGACTAGGTGAATCCGGTCTTGCACTACACTATGCTAACATAATCAATCAGATATATATGATTGCATCTCGCCCAGCCTCCCTCCCTCCAAATACGAGGGATACATTATATCAAGGTTTACCAAACAATATTAAGAGTGCCCTACCATCTCGGTTGCAATCCATTTCTGTCCCAAAAGAGCAATCTTTCACTCAGATCAAAGCTGACATGGACAAGACTCTGAAGTGGCTCGTACCATTTGCCGCAAATACAACCAAAGTTCATCAAGGCTTCGGTTGGGTTGGTGAGTGGGCAAACACAAGTAATGACTTTGGTGATAACACAACCAAAGAGAGCAACCCAATTCGCCTCCAGACACTTTACTACGCGGATAAGCAGAAAATAGATCTCCACATTATTGATTTGTTGGCATGGATTCACTATTTGATTAGCTCTGCAAGATCCAGACAAAATGCCTCAAGGCCAATGCCAGCGCGCTCTCCACCCAAGAGACCTGAACTTCAGTCTAAGATGCGACAGTTTTTGATTCTATCATTGGACCGAAACAACAAGGCATTGGGAACTCAGCTTTCTCAAGAGGATAGAATATTACTAGAGGAAGTAATTGCAAGGAGGAGGAGCCCAGGAGTTAGCAAAAGCCAGGAACTTGGTGTTTCCAAGAAAACTCAAGCCAGGCACCCTCTCAGGACCAAAAGTGCTGGGAGTTCACCTGTTAGGGAGTCCTTCGGCACCACACTCATCACCAACCGCCGAAGCTATAACGTTTTGGATATAATGGATGGCTTAGGATCTTGA 1812 0.4238 MGAVCSAGMAGENAEFGGKTLGFSGKILKKGDSFTNRKDSDSRSTDQGKNLRNKENGFSDDFGLSTSASMGEKQISRKGSLLSKASYRAVEVLDSLGSGMPKLNNSSGFVSGMNSKGKKISILAFEVANTITKGAILFHSLYEENIQFLKKEVLQSEGIQQLVSTDMKELISLAEMDKREEFNVFSREVARFGNMCKDPQWHNLHRYFSRLDMDVLGDKQNQVDAEKTMQEFAGLVNYTAELYHELNAYERFQHDYQQKIKEMESLNLPLKGESITIFQSELKHQKKLVRNLKKKSLWARNLEEIVEKLVDIVTYIHQAICELLGNHGTGAVKYGKGPQRLGESGLALHYANIINQIYMIASRPASLPPNTRDTLYQGLPNNIKSALPSRLQSISVPKEQSFTQIKADMDKTLKWLVPFAANTTKVHQGFGWVGEWANTSNDFGDNTTKESNPIRLQTLYYADKQKIDLHIIDLLAWIHYLISSARSRQNASRPMPARSPPKRPELQSKMRQFLILSLDRNNKALGTQLSQEDRILLEEVIARRRSPGVSKSQELGVSKKTQARHPLRTKSAGSSPVRESFGTTLITNRRSYNVLDIMDGLGS 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04505 603 MobiDBLite consensus disorder prediction 29 58 - -
Vifa2g04505 603 Pfam Protein of unknown function (DUF668) 340 425 IPR007700 GO:0045927
Vifa2g04505 603 PANTHER OS01G0873900 PROTEIN 32 598 IPR045021 GO:0045927
Vifa2g04505 603 MobiDBLite consensus disorder prediction 548 579 - -
Vifa2g04505 603 MobiDBLite consensus disorder prediction 31 56 - -
Vifa2g04505 603 Pfam Domain of unknown function (DUF3475) 122 178 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04505 Vifa-Chr2 1325807665 1325812186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04505 - - gmx:100780634 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04505 2 1325807665 1325812186 Vifa2g04505 2 1325807665 1325812186 ECH