Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04490 ATGGAAATTGAACCGCAACTACCCACCATCCTCGTCAAATCTAGATTCAAACGCATATGTGTGTACTGTGGCAGCACTCCTGGAAAAAATCCTAGCTACCAAATTGCTGCTATTCAGCTTGGAAAACAATTGGTCGAAAGGAAGATTGACTTGGTATATGGAGGAGGAAGTATAGGGTTGATGGGTCGTATCTCACAAGTTGTTTATGATGGTGGATGTCACGTGTTAGGAATTATTCCAAAAACACTTATGCCAAAAGAGATAACTGGTGAGAGTGTGGGAGAAGTAAGAGCTGTATCAGGGATGCACCAACGAAAAGCTGAAATGGCTAAACAAGCTGATGCTTTTATTGCAATGCCAGGTGGATATGGCACACTGGAAGAACTACTGGAAATTATTACCTGGGCTCAACTTGGTATCCATGATAAACCTGTGGGGTTATTGAACGTGGATGGTTACTACAACTCATTGTTGGCATTCATGGACAAAGCTGTGGATGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTATCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTTCCTAAGCATTGTGGTGTGGCTCCTAAGCTAAGTTGGGAGATGGAACAACAGTTGGTTAACACAGCAAAGTCAGATATTTCTCGTTGA 672 0.4286 MEIEPQLPTILVKSRFKRICVYCGSTPGKNPSYQIAAIQLGKQLVERKIDLVYGGGSIGLMGRISQVVYDGGCHVLGIIPKTLMPKEITGESVGEVRAVSGMHQRKAEMAKQADAFIAMPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPKHCGVAPKLSWEMEQQLVNTAKSDISR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04490 223 PANTHER LOG FAMILY PROTEIN YJL055W 13 213 - -
Vifa2g04490 223 NCBIfam Rossman fold protein, TIGR00730 family 17 194 IPR005269 GO:0009691|GO:0016787
Vifa2g04490 223 Pfam Possible lysine decarboxylase 61 190 IPR031100 -
Vifa2g04490 223 FunFam CASP-like protein 8 193 - -
Vifa2g04490 223 Gene3D - 10 193 - -
Vifa2g04490 223 SUPERFAMILY MCP/YpsA-like 15 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04490 Vifa-Chr2 1320677558 1320679899 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04490 K22522 - gmx:100782787 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04490 2 1320677558 1320679899 Vifa2g04490 2 1320677558 1320679899 ECH