Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04467 ATGGAAAATATTTCCATACCAAACATTGAGCTAGTCATCATAGAAAAAAACATCATAAACCAAAACAATAACCAAAAACCAACCCCATTAATTGTCACAAAGAGATTCTTAACTAGTTTGTTAAAAAAACTCCATGCAGGTTATTTCAGAATCAGTCTCTCACTTGGTGGACAAGCATTACTTTGGAAAACCCTAATTGGACCAACAAAAGACACAAACATTTCAAGACATGTTATTAGCATGTTACCTAATTCAGTTTTCATTCTACTATGGTCTTTGTCTCTTTGTATTCTCACATTACTCTCTCTTCTTTACCTCTTGAGATGTTTGTTTTTCTTCAAGATGGTAAAAGCTGAATTCTTACACCATGTAGGAGTTAACTATCTTTTCGCCCCGTGGATATCATGGTTTCTATTACTTCGATCATCACCGGTAGAATATCTAACTCCCGAAACCATGACTTATCTGATTCTATGGTGGATATTCGCGGTTCCGGTGGTGATTCTTGATATTAAGATTTATGGACAGTGGTTTACTAAAGGGAAGAGGTTTTTATCGACGGTGGCGAATCCAACAAGTCAGTTATCAGTGATAGGGAATTTGGTTGGAGCACAAGCTGCGGCTGAAATGGGATGGAAAGAAAGTGCAGTTTGTTTGTTTTCATTAGGGATGGTTCATTATTTGGTGTTGTTTGTAACACTTTATCAGAGATTCTCAGATCGTGATAGTGTTCATGTCATGTTAAGGCCAGTTTTGTTCTTGTTCTTTGCAGCACCTGGTGTGGCTTGTTTGGCTTGGGAATCTATTGTTGGAGATTTTGATACTCTTTCCAAGATGCTATTCTTTTTGTCTCTATTCCTCTTCATGTCACTGATTTGCAGGCCAGCCCTATTCAAGAGATCTATGGCAAGGTTTAATGTTGCATGGTGGGCTTACTCATTTCCTGTTACTATCCTTGCTTTGGCTTCAACAGAATATGCACAACAAGTCAATGGAACATTTTCACATATTCTAATGCTCATTCTCTTGGCACTTTCTGTTCTTGTTTCTATTTCTCTTATGGTGTTTACTCTCCTCAACTCTAAGATGCTTCTACCAGATAATGATCCTATTACAGGCTTCCTCATTGTTTAA 1134 0.3748 MENISIPNIELVIIEKNIINQNNNQKPTPLIVTKRFLTSLLKKLHAGYFRISLSLGGQALLWKTLIGPTKDTNISRHVISMLPNSVFILLWSLSLCILTLLSLLYLLRCLFFFKMVKAEFLHHVGVNYLFAPWISWFLLLRSSPVEYLTPETMTYLILWWIFAVPVVILDIKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGAQAAAEMGWKESAVCLFSLGMVHYLVLFVTLYQRFSDRDSVHVMLRPVLFLFFAAPGVACLAWESIVGDFDTLSKMLFFLSLFLFMSLICRPALFKRSMARFNVAWWAYSFPVTILALASTEYAQQVNGTFSHILMLILLALSVLVSISLMVFTLLNSKMLLPDNDPITGFLIV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04467 377 Pfam Voltage-dependent anion channel 44 358 IPR004695 GO:0016020|GO:0055085
Vifa2g04467 377 Gene3D - 38 365 IPR038665 -
Vifa2g04467 377 PANTHER S-TYPE ANION CHANNEL SLAH3 29 369 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vifa2g04467 377 CDD TDT_SLAC1_like 44 357 - -
Vifa2g04467 377 FunFam S-type anion channel SLAH1 38 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04467 Vifa-Chr2 1309938733 1309941190 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04467 K26672 - gmx:100787036 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04467 2 1309938733 1309941190 Vifa2g04467 2 1309938733 1309941190 ECH