Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04447 ATGGCATTCCCAATTCCACACCTTATCTCTTCACCAGCATCTTCATTTCTACCGTACAATCCTCTGTTAAACCTCACTCCACTTTCCTTAAACCCTAAAATCCCACCGCCGCCGCCGTCGCATCTAAATGTTCTCCACCACTCTCGCCGCCGTAAGACTGATTCTATTCTCCGATGCTCGGCGTCGTCTTACCCGGAGAATAACAACGCGAACTCTCCTAATCAAGATGACGTAACGGAACTCCCTCTGTTTCCTCTTCCTTTGGTTCTCTTCCCCGGAGCTATACTTCCTCTCCAGATCTTCGAGTTTCGCTACCGCGTCATGATGCACACACTCCTCCACACTGATCTCCGGTTCGGCGTCATCTACACCGACGCAGTTACCGGAACGGCGGAAGTCGGTTGCGTCGGAGAAGTTATAAAACACGAAAGACTCGTTGACGATAGATTCTTCTTGATCTGCAAAGGCCAGGAGCGTTTTCGTGTGAAGAAAGTGGTTCGGACGAAACCCTACCTTGTCGCGAGTGTGGCGTGGTTGGAGGATCGGCCTTCTCCGTCTGCTGACGTGGATGTTGACGGTTTGGCGAGCGAGGTGGAGACGTTTATGAAGGATGTTATTCGGTTATCGAATCGGTTAGGTGGAAAGGCGGAGAAAGAGGTTGGTGATTTGAGGAGGAACTTGTTTCCGACGCCGTTTTCGTTTTTTGTTGGAAGCACGTTTGAAGGCGCGCCGAGAGAGCAACAGGCGCTGTTGGAATTGGAAGATACTGCGGCGAGATTGGTGAGGGAGAAGGAGACTTTGAAGAATACGCTTAATTACTTGTCTGCTGCTTCTGCTGTCAAAGATGTTTTTCCATCTTCTTCATCTTCTTCTTCGTCTCCCTCTTGA 888 0.5 MAFPIPHLISSPASSFLPYNPLLNLTPLSLNPKIPPPPPSHLNVLHHSRRRKTDSILRCSASSYPENNNANSPNQDDVTELPLFPLPLVLFPGAILPLQIFEFRYRVMMHTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIKHERLVDDRFFLICKGQERFRVKKVVRTKPYLVASVAWLEDRPSPSADVDVDGLASEVETFMKDVIRLSNRLGGKAEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAARLVREKETLKNTLNYLSAASAVKDVFPSSSSSSSSPS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04447 295 Coils Coil 250 270 - -
Vifa2g04447 295 Gene3D - 78 181 IPR046336 -
Vifa2g04447 295 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 48 290 - -
Vifa2g04447 295 Pfam ATP-dependent protease La (LON) substrate-binding domain 80 268 IPR003111 -
Vifa2g04447 295 SMART lon_5 80 269 IPR003111 -
Vifa2g04447 295 SUPERFAMILY PUA domain-like 80 268 IPR015947 -
Vifa2g04447 295 ProSiteProfiles Lon N-terminal domain profile. 81 269 IPR003111 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04447 - - tpra:123894620 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04447 2 1304959806 1304960693 Vifa2g04447 2 1304959806 1304960693 ECH