Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04402 ATGGTTGCCGAAAGCTTTTGCCCGAAGCAAAACGATCATGTACCTTTCATTCTAGGTCTTCAACCATCCGCACTCGTTGACAGCGTCGCTCGTGTCGATTGCTCCTTGCTCGATCGGATTCCCGGCGAACGCGGTGGCTCCATTCCCGTTGCGATTGAAGAGCTTGAAGATATACTCAAGGAAGTTGAAACTAGTCTTCGTGATGAGGCTAATGATGATTCGAGTTCTTCTAGGATGAAAACTATGGCTGGTGGTAGTGTTGCTAATACCATTCGCGGTCTTAGTAGTGGTTTTGGAATTTCTAGTGGAATTATTGGAGCTTGTGGAGATGATGAACAAGGGCAATTGTTTGTTAATAATATGTCGTCTCATGGTGTTGATCTTTCTAGACTCCGGAAGAAGAAAGGACATACTGCACAGTGTGTTTGCTTGGTAGATGAATTGGCTAATCGAACAATGCGGCCTTGTCTCTCAAATGCTGTCAAAGTACAGGCTCAAGAGTTGACGAAAGAGGATTTCAAAGGCTCCAAGTGGTTGGTGTTGAGATATGCGGTACTCAATTTGGAAGTTATTCAAGCGGCCATTGATTTGGCCAAACAGGAAGGTCTTCTTGTTTCCTTGGACTTGGCCAGTTTTGAGATGGTTAGGAACTTTAAATTACCACTTCTGAAGTTGCTGGAATCTGGAAACATAGATCTCTGCTTTGCCAATGAGGATGAGGCAACAGAACTTTTAAGGGGCGAACAGAATGCTGATCCAATAGCTGCCGTAGAATTTCTTGCCAAATACTGCGAATGGGCTGTGGTAACATTGGGATCTAATGGATGCATTGCTAGACATGGGAAGGAGATGATACGTGTCTCGGCGATAGGAGAATCAAAGGCAACTGATGCTACAGGAGCAGGAGACCTTTTTGCAAGTGGATTTTTGTACGGAGTAGTTAAGGGTTTGTCACTAGAAGAATGCTGTAAAGTAGGCACATGTAGTGGTGGATCTGTCATCCGATCTCTTGGTGGTGAGGTAACATTAGAGAATTGGCAATGGATGTACAAGCAGATGCAAGTGAAGGGTCTTCCCACACCTGAGGGCTTATGA 1095 0.4475 MVAESFCPKQNDHVPFILGLQPSALVDSVARVDCSLLDRIPGERGGSIPVAIEELEDILKEVETSLRDEANDDSSSSRMKTMAGGSVANTIRGLSSGFGISSGIIGACGDDEQGQLFVNNMSSHGVDLSRLRKKKGHTAQCVCLVDELANRTMRPCLSNAVKVQAQELTKEDFKGSKWLVLRYAVLNLEVIQAAIDLAKQEGLLVSLDLASFEMVRNFKLPLLKLLESGNIDLCFANEDEATELLRGEQNADPIAAVEFLAKYCEWAVVTLGSNGCIARHGKEMIRVSAIGESKATDATGAGDLFASGFLYGVVKGLSLEECCKVGTCSGGSVIRSLGGEVTLENWQWMYKQMQVKGLPTPEGL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04402 364 SUPERFAMILY Ribokinase-like 75 339 IPR029056 -
Vifa2g04402 364 CDD adenosine_kinase 15 338 - -
Vifa2g04402 364 Gene3D - 22 344 IPR029056 -
Vifa2g04402 364 Coils Coil 52 72 - -
Vifa2g04402 364 PANTHER SUGAR KINASE 10 356 - -
Vifa2g04402 364 Pfam pfkB family carbohydrate kinase 70 340 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04402 Vifa-Chr2 1291834054 1291837006 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04402 - - psat:127080309 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04402 2 1291834054 1291837006 Vifa2g04402 2 1291834054 1291837006 ECH