Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04396 ATGGGTGAGAAAAGCAAGATTTTGATCATCGGAGGAACAGGTTACATAGGAAAACACATAGTAGAAGCAAGTGCTAAAGCTGGACATCCTACTTTTGCACTGATCAGAGAATCCACTCTTTCAGATCCAGCGAAAGCTGATCTTCTCAATAATTTCAAATCATTAGGCGTCAATTTGGTCCCTGGGGATTTGTATGATCATGAGAAGTTGGTGAAAGCAGTTAAGGAGGTGGATGTGGTGATTTCCACGGTAGGTCACGTTCAGCTTGCGGATCAGGTCAAGATCATCGCTGCTATTAAGGAGGCCGGTAACATTAAGAGATTTTTCCCTTCAGAATTTGGAAACGATGTCGACCGTGTCCATGCAGTAGAGCCAGCAAAGTCTGCATTTGAAACCAAAGTCCAAATTCGACGTGCTATTGAAGCGGAAGGAATACCCTATACATATGTCTCTAGCAACTACTTTGCTGGATATTTTCTCCCCACATTAGCTCAGGCAGGACAATTTGCTCCACCTCCACCAAAAGACAAAGTTTTCATCTATGGTGATGGAAATCCCAAAGCGGTGTTTAACAAGGAAGATGACATTGGAACGTTCACCATTAGAGCTGTGGATGATCCAAGGACATTGAACAAGATTCTATACATTAAACCCCCTAAGAACATTTACTCATTCAACGAGCTTGTCGCATTGTGGGAGAAGAAGATTGGGAAGACTCTTGAGAAAACTTATATTCCAGAAGATAAACTTCTCAAGGATATTGAAGAGGCACCTCTTCCAATCAATGTGATATTATCAATTAACCACTCTGTTTTTGTGAAGGGTGATCACACTAACTTTGTGATTGAGCCATCTTTTGGGGTTGAGGCTTTTGAGTTGTACCCAGATGTTAAGTACACTACTGTTGATGAATACCTTGATCAGTTTGTTTGA 933 0.4137 MGEKSKILIIGGTGYIGKHIVEASAKAGHPTFALIRESTLSDPAKADLLNNFKSLGVNLVPGDLYDHEKLVKAVKEVDVVISTVGHVQLADQVKIIAAIKEAGNIKRFFPSEFGNDVDRVHAVEPAKSAFETKVQIRRAIEAEGIPYTYVSSNYFAGYFLPTLAQAGQFAPPPPKDKVFIYGDGNPKAVFNKEDDIGTFTIRAVDDPRTLNKILYIKPPKNIYSFNELVALWEKKIGKTLEKTYIPEDKLLKDIEEAPLPINVILSINHSVFVKGDHTNFVIEPSFGVEAFELYPDVKYTTVDEYLDQFV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04396 310 Pfam NmrA-like family 7 300 IPR008030 -
Vifa2g04396 310 Gene3D - 154 306 - -
Vifa2g04396 310 CDD PCBER_SDR_a 6 305 IPR045312 GO:0016491
Vifa2g04396 310 FunFam Bifunctional pinoresinol-lariciresinol reductase 1 6 167 - -
Vifa2g04396 310 PANTHER PINORESINOL REDUCTASE-RELATED 3 310 - -
Vifa2g04396 310 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 277 IPR036291 -
Vifa2g04396 310 Gene3D - 6 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04396 Vifa-Chr2 1290712014 1290713702 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04396 K23050 - gmx:100813308 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04396 2 1290712014 1290713702 Vifa2g04396 2 1290712014 1290713702 ECH