Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04388 ATGCGAATTCCTAAGAGGCTATTCTCATTTTCTCTTCCTCAACTCGTAGCGCCTCTTTTATCTTCCCGAATTCGCGGTAAACCTTCTCGGAATTTCGTCAACATCGCATCACCAGGTGCTAGCAAGTTGCACTCTCAATATTCAATGGATGAGAACCACGACGTTGGTATGCATGACTCAAAATCAATTGGCAGGGATAGGGAAAAACAACCATGTTACAAGCCTGAAACTTTTGAATCTCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTACGATTTGGGGTATCCTAGCGAGTTACTAAATTGGTCTTTTAATTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAAAGAGGAAATATATTGAAGATGGATCGCCACAAATATGTAAAAGTAGCTTATCATGGATTTAGAGAATTGTCAAAAGAAGATAAAGTTGGGACCTACGGGAATACTTTAGTACGCAATTCATTTGACGAGCCCGACTATGCTCTAATCGATACACTTTTCTCTCTCGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATTGTAATCCTGGAAAGATTCGAGAGGGTGTTGATTATGCGCGCATGTATAAAGATGTTCGAGCTGCTGTTGATTTGTGCCACCGTGATGGGACGTTGAAGCAAATGGTTGCTAAAGATCCTGGAAGGTATATCAATGAAGACACCATGATAGTCCCCATGCTTGAAATGCTCAGAGAATCTGGACGTGCAACATTTTTAGTGACAAATAGTTTATGGGACTATACAAATACTGTCATGAATTTCCTCTGTGGATCCAGACAGGTAGATGGCAGTAACAATTTTGAATGGCTTCAATACTTTGATGTGGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCACGAGGAAAATCGTGCCAACCTATTTGAAGTTGTGCCTGAGACTGGAATGCTTCTCAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGGAACATCTCGGCGAGGATATTCACAGAAGCAAAGAATCACGCTTGCCAAGCTTTCCAGGGAGGCAATGTCGCTCATCTGCATAAACTTCTTTCCATTGAATCAAGTTCACAGGTTCTGTATGTTGGGGATCACATTTATGGAGACATACTACGTAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATCCCAGAGCTGGAGAAGGAAGTTAAACTCCTCTGGGAGTCAAGGGACACCCGAAAGGGAGAATTTTACTTGAATATTCTCATGCAGGAGCTTCAGTTCTTGAGAAGTGAGCGTGATCGCATTGAGGATGAAGTACATCATTTGAAGTGGTCTCTCAAATTCAAGAACCCAGATGCTGTTACCAAGCAAAAGTTATCTTCAGCACTTGATAAATTGGAGCTTGAAAGAGAGAGAATGCGATTAATCCATCAAGAAGCTCAAAGAAAATTACATCTAGGGTTTCACGAACCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGCCAAGTATCTAACCTGGCGTTGCACTCTCCAGACAAGTATTACAGACCCAGTGAAGATTTTATGCAGCATGAATTTGGAATTCTCGGTTCTGAGCCACGAGGAATATAA 1665 0.4174 MRIPKRLFSFSLPQLVAPLLSSRIRGKPSRNFVNIASPGASKLHSQYSMDENHDVGMHDSKSIGRDREKQPCYKPETFESLAYQGTIKKLVYDLGYPSELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLVRNSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPGKIREGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPGRYINEDTMIVPMLEMLRESGRATFLVTNSLWDYTNTVMNFLCGSRQVDGSNNFEWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARIFTEAKNHACQAFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKGEFYLNILMQELQFLRSERDRIEDEVHHLKWSLKFKNPDAVTKQKLSSALDKLELERERMRLIHQEAQRKLHLGFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALHSPDKYYRPSEDFMQHEFGILGSEPRGI 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04388 554 SUPERFAMILY HAD-like 72 545 IPR036412 -
Vifa2g04388 554 Gene3D - 208 420 IPR023214 -
Vifa2g04388 554 Pfam 5' nucleotidase family 72 544 IPR008380 -
Vifa2g04388 554 Coils Coil 419 439 - -
Vifa2g04388 554 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 72 543 IPR008380 -
Vifa2g04388 554 FunFam Cytosolic purine 5-nucleotidase 208 435 - -
Vifa2g04388 554 NCBIfam HAD-IG family 5'-nucleotidase 71 413 IPR008380 -
Vifa2g04388 554 Coils Coil 457 484 - -
Vifa2g04388 554 PIRSF NT5C2 34 552 IPR016695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04388 Vifa-Chr2 1288580307 1288587631 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04388 - - vun:114164304 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04388 2 1288580307 1288587631 Vifa2g04388 2 1288580307 1288587631 ECH