Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04384 ATGTCTGATCAAGTAAATGGCTTGCAACACAACCAAGCATGGCCAGAGCTACAGCTTCCAGACTTGTTACATAGTAATGAGACTGTTCGACAAGTTCATGCAACAATTGAAAAGGAATGGGATTTCCTTCAAAGGTCAGCTTGTCAAACGGCTGCTGGAAGGGCTATGTGGAAGCATGTGATCCATGATCCACTTGCTGCTTTACTGGCTGGGGAGAATTACTTGAGAAACCTTCATGAGAAGATGATGAAAGACCATCTCAACAATGCCCATGAAACTTCTGGAGTGATTCTTGCAGTTCGAACGCTTTGGTTTGATTCTAGACTTGAAGATTTTCTCAACTCCCCTAATGGCAGAGAAGCACAGGTTGTTCTCCTAGGTGCAGGAATGGACACAAGAGCATATCGTTTGAATTGCTTAAAGGACAGTGATGTCTTTGAGGTTGACTTTGCAGAAGTCTTGGAGAGTAGAAGCAGACATAAGAGAAAACGATTGGATGGAAAAGCTTCAAATTGCAGGTTTCTTGCCACAAAAGAGCACAGTTTGGATTCTAGAAGTGATTGGCCAGACCAACTTTTACCATCTATTGGCTTCACTCATGTAAAACTTTCACAAATTGGAGACCCAGATGCTCATTTTGGCCTCTTGAATGATCCGTTAAATCTCTTCAACAAGCTCCGCAGCTTGCCTAGGTCATTACAAACCAATCCAGAGGACGGAGCACCTTGCTGTCGCTTGTACTTAGTGGAAGCTTCTGGTTCACCCGATCAAAGTTCTGCGCATAATAAGGAGTCGGTCATTCAGTCCTGA 810 0.437 MSDQVNGLQHNQAWPELQLPDLLHSNETVRQVHATIEKEWDFLQRSACQTAAGRAMWKHVIHDPLAALLAGENYLRNLHEKMMKDHLNNAHETSGVILAVRTLWFDSRLEDFLNSPNGREAQVVLLGAGMDTRAYRLNCLKDSDVFEVDFAEVLESRSRHKRKRLDGKASNCRFLATKEHSLDSRSDWPDQLLPSIGFTHVKLSQIGDPDAHFGLLNDPLNLFNKLRSLPRSLQTNPEDGAPCCRLYLVEASGSPDQSSAHNKESVIQS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04384 269 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 194 IPR029063 -
Vifa2g04384 269 Gene3D Vaccinia Virus protein VP39 37 200 IPR029063 -
Vifa2g04384 269 Pfam Leucine carboxyl methyltransferase 47 199 IPR007213 GO:0008168|GO:0032259
Vifa2g04384 269 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE YKTD-RELATED 180 234 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04384 - - lja:Lj5g3v2297990.1 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04384 2 1288491351 1288492637 Vifa2g04384 2 1288491351 1288492637 ECH