Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04373 ATGGATAGTGACGACGATTTTGAACCCTTGCCCCCTTCTCCCATCATCGAACGAAAGCTCAAGCGTTTGAAAAAGGCATCTAGGGTTTCCGAAACCCCCAAACCTTCATCACCACCTATCAATTCACCTAGGGTTTCCGAAAACCCTCCACCTTCACCTTCCCCTATCAAATTACCTGAATTCGAAAACAATTTAGTCTTAGAGGAGTTAAACGGTGAATCTATCGACGAAATTGAAACTTTGACAGAGAACAATGTCACTGTAACTGTTGACGAAGACTGTTTGGGTGCTAGGAGGGTTTTGAAGTTTGATTCCGTGGACGATGAAATCGACGGAAAGTTCACCGAGAAGACAACGGAGGAATTTGGGGATACAAAAACTGACGAGTTGGAAGAAAAGCAACATAATGCAGAAGATCTGTCCGAGAAGAAAGAGAGTAAGAAGAAGAAGAAGAGAAGTGACGACGGTGACCGAAATGAGAAGAAGCAGCGGAAAGAATCTATCTCCAGTAAAAGAAAAGCTGAGAAGGAAAGACAGGAGAATCTCAAACAGCTTCGTGCTGAGTCTCAAAGACTTCTTCGAGAAACAAGAGATGCTGCGTTTAAACCTGTTCCTCTGGTTCAGAAGCCGATTTTGTCTATATTGGATAAAATTCGTAAGAGAAAATTGGAGTTCTTGAAGAAATCTAATGTTTCTTTTGATGATAATGATGACTTTGCTGTGGATGTTGATGCTGAGCCTCGTTGTCCTAGTGAAGACATAACTAATAAGATTGAAAAAGCCGAGATGGAGGAAGCACCAGCAGCTATGTGCCCTGCAGTCACAGAGAACAATTTAAGTGAACCCGATGATGGTGAATCTAATGCTGCTGTAGATCACTTGAGTGGTGAAAACATTCCTTCTCCCGTGTTTCAGGCTGTGGTTTCAGAACCTGTTAATGCGTTTCGAGCTCCTGTTGACGATACTCAGGATCTCTTTTCTGATTCTGATTCTGAAATGAGTGATATTAAAGAAGAGGCTGTAAATGAGAAGTTGAGTAACCCTTCCGAAGAAGTGTTTGCCCCATATATGCTTGCAATGAACTTGACACTTGATTCTGCTCCTATTGATGATGATGTTTCTTCTGGTGAGGAGGACAATAACAAGGAGAACACAGTACCGCATTTACAAGGATCAGCTGACGTGAGTTTACCTCCACGTGGTGACCCTGTTAAGGCTTTTGTTGATGAAGAAGCTGAAGAGGAAGATGACAGTGACAACGATCAACAACGCTTCCGAGATAATGAAGAAGATGAAGACGATGATGATATTGAGGAACTTAATAATATGATAGCAACTGGATATGAAGAAGAGCCAATAGATAGGGAGAAGCGTGACCAACTCCACCAGCAATGGCTTGAGCAGCAGGATACAACTGGGATGGATAATCTACTCCAAAAACTTAATTGTGGTTCAAAAATAAATGAATCAACATTCCTTGACATTGAAGAGGATGACGAGGAAAGCAAAGAAACTGAAAATGAATCTGATGATGAAAATGAAGACTTCATTACTCAATCTGATGCTGTGAAGATCAATATGAAAAAGGTGAGGCAGATGATCCCACATATGTTTACTGATAAAGAGGAAGCATATGTATCATCTGATGAGGAAACCGAGGAGAGGCTAGCTAAACAAAGCCTCTCTTATAAAGTTGAGAAGAAAGCTCAATTTTTTTCACCGGCTGAAGATGAAAACAGCAGGGGAATTTTCAATCTCATAAAGAAAACAAATGTAGCAGATACCAAGAGAAAAGGAAGAACTCCTTCCATATTTGATATGCCACACATTGGACAAAACACAAATATATCATCAAAGTCATCTTTTATCCGCCATACTTCAAATCAGTCTATGCCTGCTTCTAAAAAACAAGGCTCAAACAAAATCCGATCATCATATATATTTGGGCGAGATGACAGCAACAGCAGACCTTCAGTGTTGATATCGGAGGATTCTTCAGATCTGATTGTAAGAGAGAGTCAAGCACCCAAAGTTGTTTCTGCCAAGTTCCAAAGAAATTCACAGAACAAGTATGCCGCTTCAAGTTCTAAACCTCAAGAGTCAAGTGTATCACTGTTGGAGGTATTAAGGAGGTCTTCAATTCATACAGAGCGTTCCGTCCAGAGTACTGTAGTTCAGCAAAATGAATCTGTGTTCCAAGCATTTAAGTTAACGAAGAAGTCAATTAAGACGGGAGACAAAGTTTGA 2247 0.4063 MDSDDDFEPLPPSPIIERKLKRLKKASRVSETPKPSSPPINSPRVSENPPPSPSPIKLPEFENNLVLEELNGESIDEIETLTENNVTVTVDEDCLGARRVLKFDSVDDEIDGKFTEKTTEEFGDTKTDELEEKQHNAEDLSEKKESKKKKKRSDDGDRNEKKQRKESISSKRKAEKERQENLKQLRAESQRLLRETRDAAFKPVPLVQKPILSILDKIRKRKLEFLKKSNVSFDDNDDFAVDVDAEPRCPSEDITNKIEKAEMEEAPAAMCPAVTENNLSEPDDGESNAAVDHLSGENIPSPVFQAVVSEPVNAFRAPVDDTQDLFSDSDSEMSDIKEEAVNEKLSNPSEEVFAPYMLAMNLTLDSAPIDDDVSSGEEDNNKENTVPHLQGSADVSLPPRGDPVKAFVDEEAEEEDDSDNDQQRFRDNEEDEDDDDIEELNNMIATGYEEEPIDREKRDQLHQQWLEQQDTTGMDNLLQKLNCGSKINESTFLDIEEDDEESKETENESDDENEDFITQSDAVKINMKKVRQMIPHMFTDKEEAYVSSDEETEERLAKQSLSYKVEKKAQFFSPAEDENSRGIFNLIKKTNVADTKRKGRTPSIFDMPHIGQNTNISSKSSFIRHTSNQSMPASKKQGSNKIRSSYIFGRDDSNSRPSVLISEDSSDLIVRESQAPKVVSAKFQRNSQNKYAASSSKPQESSVSLLEVLRRSSIHTERSVQSTVVQQNESVFQAFKLTKKSIKTGDKV 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04373 748 Coils Coil 495 515 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 449 464 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 368 473 - -
Vifa2g04373 748 PANTHER DNA LIGASE-LIKE PROTEIN 1 747 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 106 189 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 488 518 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 493 516 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 598 617 - -
Vifa2g04373 748 Coils Coil 168 195 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 36 57 - -
Vifa2g04373 748 Coils Coil 127 150 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 1 60 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 426 440 - -
Vifa2g04373 748 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04373 Vifa-Chr2 1285474268 1285478102 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04373 - - aprc:113866285 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04373 2 1285474268 1285478102 Vifa2g04373 2 1285474268 1285478102 ECH