Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04363 ATGCCCATTGCAACAAAGCTTCACGTTCGTTCTAAACCGCGAGCTATTCTGAAACCAGGCGGAAACATAGTTCCGGTTCATGAAGAAACAACTAGACATAACAAGAAGAAAACACAGCAGGGTCCAAGAAAACAGGTGGCGGAAATTTCTGAGTCACTTGTTGTTGTCGGAAGTAACGTGTGTTTGGATTTGGACAGCACATGTTCCTCGGATTCCTCTTCTGTCAAAAAGGTCAACTCTGCGAATGGAAATGGAAATTCAAAGATGAAGCGCAACGGGTTTAAGCTGCCGGTGAGGGATGCTGCCCACGTGTCTCTGCCTTATAAGGGTGAGCCACCGTCCAAGACATGCGATTGGATCACACCCAATTCAGACCCTGTTTATACTTCTTTCCATGACGAAGAATGGGGTGTTCCAGTTATTGATGATGATACAAAGCTATTTGAGCTTCTAGTATTTTCACAAGCATTAGCAGAACACACTTGGCCAACCATTCTTAACCACAGAAACATTTTCAGGAAATTTTTCGAAAATTTTGATCCATCTTCAATTGCACAGTTTAATGAGAAGAAGTTGCTAACACCAAAAATAAATGGCAACAACCCTTTGTTATCCGAACAAAAGGTTCGCGCCATTGTGGAAAACGCTAAACAATTACTTAAGGTTCAACATGAGTTTGGTTCATTCAGCCATTACTGTTGGAAATTCGTTAACAACAAACCGATAAAAAATGAATTCCGATATGGACGACAAATATCAGTGAAAACTCCGAAATCAGAACTCATTAGCAAGGATTTGATGAGAAGAGGTTTCCAATGTGTTGGACCAAAAGTAGTTTATTCATTCATGCAAGTATCAGGGCTAGTTAATAACCATTTATTAACATGCTTCAGGTACCAACAATGCAACGTGACAATGAAAAATGAAATTAAAACTGAATAG 942 0.3992 MPIATKLHVRSKPRAILKPGGNIVPVHEETTRHNKKKTQQGPRKQVAEISESLVVVGSNVCLDLDSTCSSDSSSVKKVNSANGNGNSKMKRNGFKLPVRDAAHVSLPYKGEPPSKTCDWITPNSDPVYTSFHDEEWGVPVIDDDTKLFELLVFSQALAEHTWPTILNHRNIFRKFFENFDPSSIAQFNEKKLLTPKINGNNPLLSEQKVRAIVENAKQLLKVQHEFGSFSHYCWKFVNNKPIKNEFRYGRQISVKTPKSELISKDLMRRGFQCVGPKVVYSFMQVSGLVNNHLLTCFRYQQCNVTMKNEIKTE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04363 313 Pfam Methyladenine glycosylase 123 298 IPR005019 GO:0006284|GO:0008725
Vifa2g04363 313 SUPERFAMILY DNA-glycosylase 116 302 IPR011257 GO:0003824|GO:0006281
Vifa2g04363 313 PANTHER OS04G0501200 PROTEIN 8 311 - -
Vifa2g04363 313 MobiDBLite consensus disorder prediction 72 89 - -
Vifa2g04363 313 MobiDBLite consensus disorder prediction 72 92 - -
Vifa2g04363 313 Gene3D Hypothetical protein; domain 2 114 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04363 Vifa-Chr2 1282992298 1283001123 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04363 K01246 - gmx:100306457 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04363 2 1282992298 1283001123 Vifa2g04363 2 1282992298 1283001123 ECH