Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04295 ATGGATACTGTTCCCGATCAAGCCACTAGTATATGCCCTCACTGTGATCGGGCTATTCCTGCTGCAAACATTGATTTGCATTCTGTTCATTGCTTACGGAACCTTGAAAAGTGTAAGGTTTGTGGTGATATGGTGCCCAAACAACATGCTGAGGATCATTACTTGAACACGCATGCGCCGGTTGCATGTTCATTGTGCAGTGAAACAATGGGGCGTGATATTTTAGATATCCATAAAGGTGAAAAATGCCCTCAAAGGATTGTCACCTGTGAGTTCTGTGAGTTTCCATTGCCAGCAATTGATCTGGCAGAGCATCAGGATGTATGCGGGAATCGAACAGAGATGTGCCACCTTTGTAACAAATATGTTAGATTACGTGAAAGATACATTCATGAAGTTGATTGCAACAGACTTGAAGCCAATGCTGCAGGATCTTCAAGGGACGAGAGGCCAGCTGAAAGAGATGAAAGTGCTCCAAGAAGGCCGCAGAATGAATTCTCAAAAAGTCGTCTTCTTATCACAATAGCAATAACTGGTATTGCTGTTATACTTGGATCGATTTTTTATCCAAGAAAGGTAGAGGACAGTAATGTGCATTAG 600 0.425 MDTVPDQATSICPHCDRAIPAANIDLHSVHCLRNLEKCKVCGDMVPKQHAEDHYLNTHAPVACSLCSETMGRDILDIHKGEKCPQRIVTCEFCEFPLPAIDLAEHQDVCGNRTEMCHLCNKYVRLRERYIHEVDCNRLEANAAGSSRDERPAERDESAPRRPQNEFSKSRLLITIAITGIAVILGSIFYPRKVEDSNVH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04295 199 MobiDBLite consensus disorder prediction 144 163 - -
Vifa2g04295 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 6 196 - -
Vifa2g04295 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 114 IPR013083 -
Vifa2g04295 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 57 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04295 Vifa-Chr2 1263195883 1263198663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04295 - - zju:107421365 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04295 2 1263195883 1263198663 Vifa2g04295 2 1263195883 1263198663 ECH