Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04263 ATGGATCGTTTGCGTCCTCGGAGTAGATCAGTTTTTTCTGGATTCACCAATTCTGAGATTGAGAAAATGGAGAAAGTGCTGAGGGAAACGAAAGGACAAACGCTGACTCAGGATTTTTACCAAAAATTGACTAAAAGTTTCAATTATTCATCTGGTCGTGCTGGGAAACCTCTCCTCAAATGGACTGAGATGGAAAGTTGGTTTCAGACTAGGCTCCAGGAATCACCACAACCACAAGTACTTGAAAATGAATTGGTTTCTCCTCAAGGACTTCAATGTAAACACGGAGAAATTGTTCGAGACCCATCAGAGTTGGAATTTGAAGCTAGGTCTTCAAAAGACGAAGCATGGTATGATGTTGAGACTTTTCTTGCTCACAGATTTCTTAGCACAGGGGAAGCTGAAGTCAAAGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAAAGTTCTGTCCGAGAACGTTCAGTTCCGTTTGAAAATTCAGAGTGTTCCGGCCTGAAAACTGGAGACCCTGTCCTATGCTTCATGGAGAGGAGAGATCAAGCAATCTACTACGACGCTCACATTTTAGAGATCCAGAGGAGAATGCATGATATCCGTGGTTGCAGGTGTCATATCTTAATTCGGTACGATCACGACAACACTGAGGAAAGAGTTCGCTTGAGAAGACTTTGCCATAGACCAAGATCTTAG 711 0.4262 MDRLRPRSRSVFSGFTNSEIEKMEKVLRETKGQTLTQDFYQKLTKSFNYSSGRAGKPLLKWTEMESWFQTRLQESPQPQVLENELVSPQGLQCKHGEIVRDPSELEFEARSSKDEAWYDVETFLAHRFLSTGEAEVKVRFVGFGAEEDEWVNIKSSVRERSVPFENSECSGLKTGDPVLCFMERRDQAIYYDAHILEIQRRMHDIRGCRCHILIRYDHDNTEERVRLRRLCHRPRS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04263 236 Pfam SAWADEE domain 104 231 IPR032001 GO:0003682
Vifa2g04263 236 Gene3D - 102 163 - -
Vifa2g04263 236 Gene3D - 164 236 - -
Vifa2g04263 236 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 10 235 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04263 Vifa-Chr2 1252372897 1252375418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04263 - - gmx:100801021 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04263 2 1252372897 1252375418 Vifa2g04263 2 1252372897 1252375418 ECH