Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04260 ATGAAACTGGACACAGAAACAAAGCGGTGTCTTCCAAATAATGTTGCAGTTAAAGATATTACTTGCATGGATAATAACCAATCAATGGTGGTGATTGAGAAAGTGAACAAAACGGTGCGTTTACTTGGTTTTTTGATACAAAACGGTTTTTCTAAGAGTAATAGAGTTATACAGGATATGCATGAGATGATGAAGAGAGGAAAAAACATTGGGAAAGCACTCAACACTGTGATAGTGAAGCACCACGAAGCGATCTCGTGTCGTCCACGTGATGCTGATATGTATTTTGTTTCACCGTTGGAGTATCAGTTCAGTTGTAGCAGCAGTCCACCGCGTCTCTCTCGCGGTGCCAGCAGCAGGAGGAAGCTTTTATCTCCGGCAAAGGAGGTGTGTCGCAGGACTGGTAATGAAAGGAGGCGCGTGAAGGTGACGACGGTGTCGAGGGAGATAGAAAAGGAGGGAGAGTTTCATGTTGACCAAGCCGCGGAGGAGTTCATTGACAGGTTTTACAGAGAGCTGAGGTTGCAGAAATGGTTGGACCATCATCATCATCATCATCATCACTATTGA 570 0.4456 MKLDTETKRCLPNNVAVKDITCMDNNQSMVVIEKVNKTVRLLGFLIQNGFSKSNRVIQDMHEMMKRGKNIGKALNTVIVKHHEAISCRPRDADMYFVSPLEYQFSCSSSPPRLSRGASSRRKLLSPAKEVCRRTGNERRRVKVTTVSREIEKEGEFHVDQAAEEFIDRFYRELRLQKWLDHHHHHHHHY 189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04260 189 Pfam Cotton fibre expressed protein 158 177 IPR008480 -
Vifa2g04260 189 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 30 181 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa2g04260 Vifa-Chr2 1251413028 1251413597 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04260 - - mtr:11431553 285.419