Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04258 ATGGGAGAAGAATCCAAATCTCTCTGGGAAGGTAAACTCACGGTCGAGCTAACAAGCGTCGCTGCGGAACAAGCGTGGCCGGCTTTAGAGGATTTCTGCAACCTACACAAATGGATCCCGATAAACACTTGTTACCACGTTGAAGGTGTTCAAGGACAACCTGGTTTGGTTCGATACTGTTCTTCAACAGTAAAAGCGGTTGTTGAAGATGAAGCTGATGATGCTGTTGAGTCTGAGACGACAGTTAAGTGGGTGAAAGAGAAGCTGTTGATGATGGATCCTGTACGACGTTGTTTGTCGTATGAAGTTGGTGAGAACAACATGGGGTTTGAGTCTTATGTGGCGACACTGAAAGTGATTCCGGTGGGTGGTGATGGTGAAAGTGTTGGGTGTTTGATTGAGTGGGGGTTTGTTTGTGATCCTGTGGAGGGTTGGAGTTTGGAGGATTTTGAGTCTTATATTCAGTATTGTCTTCAGTTTATGGCTAAGAAGATTCAGGATGAATGCTCTGTAACTCGTTAA 522 0.4502 MGEESKSLWEGKLTVELTSVAAEQAWPALEDFCNLHKWIPINTCYHVEGVQGQPGLVRYCSSTVKAVVEDEADDAVESETTVKWVKEKLLMMDPVRRCLSYEVGENNMGFESYVATLKVIPVGGDGESVGCLIEWGFVCDPVEGWSLEDFESYIQYCLQFMAKKIQDECSVTR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04258 173 PANTHER LACHRYMATORY-FACTOR SYNTHASE 4 169 - -
Vifa2g04258 173 SUPERFAMILY Bet v1-like 18 167 - -
Vifa2g04258 173 CDD PYR_PYL_RCAR_like 9 166 - -
Vifa2g04258 173 Pfam Polyketide cyclase / dehydrase and lipid transport 14 156 IPR019587 -
Vifa2g04258 173 FunFam Lachrymatory-factor synthase 2 170 - -
Vifa2g04258 173 Gene3D - 3 172 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04258 Vifa-Chr2 1250784817 1250785338 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04258 - - gmx:100798368 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04258 2 1250784817 1250785338 Vifa2g04258 2 1250784817 1250785338 ECH