Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04254 ATGGCAGAAGAAAATAAAGCAACAAAATGGGAAGGTAAAGCAACGGTTGAGGTAAGAGGCACCGATGAGGAAACAGTATGGAGTGTGTTAGAAGATTTCTGTAACCTACAAAAATGGCTACCAATTGATAGTTGTTATAAATTTGAAGGAGTTGAAGGTGAACCTGGTCTTGTTCGTTATTGTGCTTCAACTAAAAAAGGAATTGTTAAGTGGTTCAAAGAGAAGCTGTTGACAATAGATCATGCACAACGTTGTTTGTCCTATGAAATTGTTGATAACAACATGGGATTTAAGAACTACGTGGCTATAATGAAAGTACTACCGCTGCCAATCAACGGTGGTGATGATGATGCTGGTAAAGCTATAGGGTGTATGATTGAATGGGAGTGTGTTTGTGATCCAGTTGAAGGATGGAGTTTACAAGATTTGCATTCTTATATTGGAAACTTTCTCAAGTGTATGGCCAACAAGATTGAGCTTGCATACTCAAATAATCAAACTTAG 504 0.377 MAEENKATKWEGKATVEVRGTDEETVWSVLEDFCNLQKWLPIDSCYKFEGVEGEPGLVRYCASTKKGIVKWFKEKLLTIDHAQRCLSYEIVDNNMGFKNYVAIMKVLPLPINGGDDDAGKAIGCMIEWECVCDPVEGWSLQDLHSYIGNFLKCMANKIELAYSNNQT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04254 167 CDD PYR_PYL_RCAR_like 10 158 - -
Vifa2g04254 167 PANTHER LACHRYMATORY-FACTOR SYNTHASE 3 163 - -
Vifa2g04254 167 SUPERFAMILY Bet v1-like 23 159 - -
Vifa2g04254 167 Pfam Polyketide cyclase / dehydrase and lipid transport 13 153 IPR019587 -
Vifa2g04254 167 Gene3D - 3 166 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04254 Vifa-Chr2 1250083999 1250084502 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04254 - - gmx:100798368 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04254 2 1250083999 1250084502 Vifa2g04254 2 1250083999 1250084502 ECH