Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04251 ATGTCTTCCATCGAATCGCAGATGGAACCACTAACGTCGGGAGCTAGCAACCGGATAATTCCGCTTCTGAAAGCGTTTAGAGGATCGCTTATCTTTGTTTACACTTTCTTTCTGTCGTTTCTTTTGTTCGTTCGACGGAACAGGGTGGCGGTGCCGGGTTCTCCGAAGAAGAATTTGAAGAAACGGTGGTTGGTTAGAGAGGAAGAGGATACGTTTAGGAGAAGAGAGTTGGCGCAGGATGTTGGAATGGGTCGTGATGACGGTTGTTGCCGGTGGAATACTTCGATTTTTTATGGTGTGAGGAATAACGCTTTGTTTTGTCGTTCTTGGTTCCCGGTTTTTGGTGATCTTAAGGGCATTATGATCATCATTCACGGGCTCAATGAACACAGTGGAAGATACGCAGATTTTGCTAGGCAGTTAACATTGTGCAACTTTGGTGTCTATGCAATGGACTGGATAGGTCATGGAGGTAGTGATGGATTACATGGTTATGTTCCTTCTCTTGATCAAGTGGTTGCAGACACAGGAGCTTTCTTGGAAAGTATTAAATCAGAGAATCCTGGGATACCATGCTTTCTCTTTGGTCACTCCACTGGTGGTGCTGTGGTGTTGAAAGCGGCATCACACCCTCAAATTGAAGCGATGGTGGAAGGAGTTATATTAACCTCACCAGCGTTGCGTGTGAAGCCTTCTCACCCAATAGTTGGTGCTGTTGCTCCAATATTTTCTTTGGTAGCTCCGAGGTTCCAATTCAAAGGAGCAAACAAAAGGGGCATTCCAGTTTCAAGGGATCCAGCAGCCTTAGTGGCGAAGTACTCGGATCCTCTAGTCTACACCGGACCTATAAGAGTCCGAACTGGCCACGAAATACTGCGAATATCGTCGTACTTAATGCGAAACTTCAAGTCAGTGACAGTACCATTCTTTGTCCTGCATGGAACTGCTGATAAAGTAACCGATCCATTGGCATCACAAGACTTGTACAACAAGGCAGCTTCTGAGTTCAAAGACATAAAGCTTTATGATGGCTTCTTGCATGACCTCTTGTTTGAGCCTGAACGTGAAGAGATAGCTCAGGACATTATCAACTGGATGGAAAAGAGATTATTCAACAATATCTGA 1125 0.4498 MSSIESQMEPLTSGASNRIIPLLKAFRGSLIFVYTFFLSFLLFVRRNRVAVPGSPKKNLKKRWLVREEEDTFRRRELAQDVGMGRDDGCCRWNTSIFYGVRNNALFCRSWFPVFGDLKGIMIIIHGLNEHSGRYADFARQLTLCNFGVYAMDWIGHGGSDGLHGYVPSLDQVVADTGAFLESIKSENPGIPCFLFGHSTGGAVVLKAASHPQIEAMVEGVILTSPALRVKPSHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALVAKYSDPLVYTGPIRVRTGHEILRISSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPEREEIAQDIINWMEKRLFNNI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04251 374 PANTHER PHOSPHOLIPASE-RELATED 101 369 - -
Vifa2g04251 374 FunFam Monoglyceride lipase 91 370 - -
Vifa2g04251 374 SUPERFAMILY alpha/beta-Hydrolases 104 370 IPR029058 -
Vifa2g04251 374 Gene3D alpha/beta hydrolase 92 371 IPR029058 -
Vifa2g04251 374 Pfam Serine aminopeptidase, S33 117 354 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04251 Vifa-Chr2 1249292121 1249294573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04251 1 290 Acyl Lipid Metabolism Gene Families AT5G11650 65.894 1.43e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04251 - - gmx:100816265 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04251 2 1249292121 1249294573 Vifa2g04251 2 1249292121 1249294573 ECH