Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04242 ATGTTTTCCAAAACTGAACAGCAAGAACGAAAGCAAAAGGGAGAATGGTTATCAGGAAGTTTCAAACCAGAGAATTTCATTCCAGGTCTTGTTATAGGTTTCATTTGTGGCTTGTTGATTGATTTAACAAAGCCAACTAGAAATCACTTGTCCAAGAAAATCTTCTCATCTAACAAGCTTCAACACCAACTCTCACTCTCAAGTAATGGTGATCAAGAACTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAGATCCGGAAAGATTGCGTCTCAATGTGCTCATGCTGCAACTGGCATGTATTCTGAGTTAACGCAAAGCAACCGGTCTCTTTTAAGACATTGGGAACAGGGCGGCCAGCCCAAAATTGTTGTGACTTGCAAGAACCAACAAGAAATGAATAAGCTAAAGGAAACAGCCGAGAGTGTTGGCCTCCCTACTTTTGTTGTCGCCGATGCTGGACGAACACAGGTTTCGGCAGGATCAAAGACTGTTCTTGCTGTTGGACCTGGTCCAAAAGAAATCGTGGATTCGGTGACCGGAAGGTTGGCTCTGCTATGA 567 0.4303 MFSKTEQQERKQKGEWLSGSFKPENFIPGLVIGFICGLLIDLTKPTRNHLSKKIFSSNKLQHQLSLSSNGDQELKMVLVVRQDLKMRSGKIASQCAHAATGMYSELTQSNRSLLRHWEQGGQPKIVVTCKNQQEMNKLKETAESVGLPTFVVADAGRTQVSAGSKTVLAVGPGPKEIVDSVTGRLALL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04242 188 CDD PTH2 75 188 IPR002833 GO:0004045
Vifa2g04242 188 Pfam Peptidyl-tRNA hydrolase PTH2 74 188 IPR002833 GO:0004045
Vifa2g04242 188 NCBIfam aminoacyl-tRNA hydrolase 74 188 IPR002833 GO:0004045
Vifa2g04242 188 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 72 188 - -
Vifa2g04242 188 PANTHER PEPTIDYL-TRNA HYDROLASE 2 5 188 IPR002833 GO:0004045
Vifa2g04242 188 Gene3D Bit1 69 188 IPR023476 -
Vifa2g04242 188 SUPERFAMILY Peptidyl-tRNA hydrolase II 73 188 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04242 Vifa-Chr2 1245444638 1245446625 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04242 K04794 - gmx:100527852 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04242 2 1245444638 1245446625 Vifa2g04242 2 1245444638 1245446625 ECH