Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04237 ATGTCATTTCTTCAGTGGCGCGCTGCCTCAATATTGCATGTTTCCCCCTCTCTCGCATTGCACTTGGAGCCGTACAACAGTAGGATGATGTCGAGAGCATCACGAATGACGCACCACCTCCACGCTTTCTCATCTCGCGTTTCCTCCACGCGCCCCATTTCCTCACTCTTTCTCCACAGGAATGTTGATACTTCACAGTCGATGGATGTTGCTAATGTAAACTTTACGAATTATGATAGCAACTGTCGAGCTAGGAAGATATGGACTTTCACTCCTGTTTGTATGGGCAGACGTTCCAGCAAAATCGCCGGTCGAAAGGAAGCCAACAATGCAAAGAAAGCTAAACTGTACTCAAGGATTGGGAAGGAAGTTGTGTCTGCTGTAAAGAAAGGTGGTCCGAATGTTATGTCTAATTCAGCCCTGGCTGCTGTACTTGAGAAAGTAAAGGAGCTCGATGTTCCTAGAGATATTGTCGAGCGCAACATCAAGAGAGCAACTGAGAAGGGACAAGAGGCTTATATTGAGAAAATTTACGAGGTTTATGGTTATGGAGGAGTTAGTATGGTAGTTGAGGTATCAACTGACAAGATAAATCGTTCTATAGCAAAGATTAGAGATGTGGTCAAGGACTGTGGAGGAAAGATGGCAGATTCTGGGTCTGTGTTGTTTAAGTTTACGCGTGCTCGGGTAGTAAACATTAAAGTAAGTGATGCTGACAAAGATCAGCTGCTTGGAATTGCTTTAGATGCTGGAGCCGAGGATGTAATTGATCCTCCAACTTACGAAGATGATACTGAAGAGGATAGGTCAGAAAGGTATTATAAGATTGTTGGTTCTTCAGAGAACTATTCATCTATAGTATCAAAATTGCGAGAGGAGGGCATAGATTTTGAGCCTGATAATGGTTCTGAGCTTCTTCCAAATACCACCATTGAGGTAGATGATGAGGCTATGGACTTGAACAGAGAACTTATGAGCAAATTACTTGAGCTTGATGATGTTGATGCTGTTTATACAGATCAGAAATAG 1029 0.4295 MSFLQWRAASILHVSPSLALHLEPYNSRMMSRASRMTHHLHAFSSRVSSTRPISSLFLHRNVDTSQSMDVANVNFTNYDSNCRARKIWTFTPVCMGRRSSKIAGRKEANNAKKAKLYSRIGKEVVSAVKKGGPNVMSNSALAAVLEKVKELDVPRDIVERNIKRATEKGQEAYIEKIYEVYGYGGVSMVVEVSTDKINRSIAKIRDVVKDCGGKMADSGSVLFKFTRARVVNIKVSDADKDQLLGIALDAGAEDVIDPPTYEDDTEEDRSERYYKIVGSSENYSSIVSKLREEGIDFEPDNGSELLPNTTIEVDDEAMDLNRELMSKLLELDDVDAVYTDQK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04237 342 SUPERFAMILY YebC-like 95 341 IPR029072 -
Vifa2g04237 342 PANTHER UNCHARACTERIZED 62 342 IPR002876 -
Vifa2g04237 342 Gene3D - 224 309 IPR026564 -
Vifa2g04237 342 Gene3D - 97 173 IPR017856 -
Vifa2g04237 342 Hamap Probable transcriptional regulatory protein YebC [yebC]. 95 342 IPR002876 -
Vifa2g04237 342 Gene3D - 176 339 IPR026564 -
Vifa2g04237 342 Pfam Transcriptional regulator 99 340 IPR002876 -
Vifa2g04237 342 FunFam Putative transcriptional regulatory protein 224 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04237 Vifa-Chr2 1244145944 1244150193 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04237 - - psat:127084461 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04237 2 1244145944 1244150193 Vifa2g04237 2 1244145944 1244150193 ECH