Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04235 ATGGCTTTCATAGTCTCACCAACTATAATGAGAAACTCCATTTCATTGGAAACTAGAGTTGTTTGTGATATGCCTCATAACTCTTATAAGGATAAGTTTTTATTTAGAAACAAGGGCATTTATAAGGGCACACGCAACCTTCGAGATCATTTGACCGTCGCAAATGTTGCGAGCCCGTCGCGTGTGATTGCTCCGCCTCCACCGCCGGAGAAACTTCCGGGGAACACCGGTGGCCAACACCATGTTGCATGGACTAGTGTCCCTCAAGAAAGATGGGAAGGAGAACTTCTTGTTCAAGGACATATTCCACTTTGGCTGAAAGGAACGTACATAAGGAATGGTCCAGGCATGTGGAACATAGGAGACTACAATTTCAGGCATCTCTTTGATGGCTATGCCACCTTGGTTGGACTTCACTTTGAGAATGGGCAGTTAACCGCCGGTCACCGACAAATCGAATCTCAAGCTTATCAAGCAGCAAAGAAAAATCAGAAGATATGTTATCGTGAATTTTCTGAAGTGCCTAAGGCTGAAAATTTCTTAGCTTACGTAGGGGAGTTAGCGAGTCTTTTCTCGGGTTCCTCGCTTACCGATAATGCCAACACTGGTGTGGTGAAGCTCGCCGATGGGAGGGTTGTTTGTCTGACAGAGACACAAAAAGGGTCTATAGTGATAGATCCTGAGACGCTGGAGACAATTGGAAAATTTGAGTATAGTGATTCTTTGGGAGGACTTATTCATTCTGCACATCCCATTGTGACGGATAAGGAGTTTTTAACGTTAATCCCTGACCTTGTGAAACCAGGATACTTGGTGGTGAGGATGGAACCTGGCTCTAATGAGAGGAAAGTTATTGGGCGAGTCGATTGTCGAGGCGGATCATCGCCCGGTTGGGTTCATTCCTTCCCTGTTACTGAACACTATGTTATTGTGCCTGAAATGCCATTGAGGTATTGTGCTCAGAATTTGCTCAGGGCTGAACCAACTCCTTTATACAAATTTCAGTGGCATCCTGAGTCAAAAGCTTTTATGCATGTAATGTGCAAGACTAGTGGAAAGATTGTGGCAAGTGTGGAAGTGCCTCTATTTGTTACTTTCCATTTCATAAATGCATATGAAGAGAAAGATGAAGATGGGAGGGTGACTGCTTTCATTGCTGACTGCTGTGAGCACAATTCAAACCCCGGCATTCTTGACAAACTTAGATTACAAAACCTTCGCTCATTTAATGGCAACGATGTTCTACCAGATGCTAGGGTTGGTAGGTTTAGAATACCACTAGATGGAAGTCCATATGGAACATTAGAAGCAGCATTAGACCCAAATGAACATGGGAGAGGCATGGATATGTGCAGCATAAACCCTAATTATTTAGGGATGAAATACAGATATACATATGCTTGTGGAGCACAACGCCCTTGTAACTTCCCCAACACCCTCACCAAGATTGATCTAGAATCGAAAAGGGCTAAGAACTGGTATGAAGAAGGAGCTGTGCCCTCGGAACCATTCTTTGTGCCTCGACCAGGTGCAACTGAAGAAGATGATGGCGTGGTAATCTCCATAATCAGTGAGAAAAATGGAGAAGGATATGCATTGGTGTTAGATGGTTCCACTTTTGAAGAGGTTGCTAGGGCTAAGTTCCCTTATGGTCTTCCATATGGGCTGCATGGATGCTGGGTTCCAAAACAATAA 1695 0.4407 MAFIVSPTIMRNSISLETRVVCDMPHNSYKDKFLFRNKGIYKGTRNLRDHLTVANVASPSRVIAPPPPPEKLPGNTGGQHHVAWTSVPQERWEGELLVQGHIPLWLKGTYIRNGPGMWNIGDYNFRHLFDGYATLVGLHFENGQLTAGHRQIESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELASLFSGSSLTDNANTGVVKLADGRVVCLTETQKGSIVIDPETLETIGKFEYSDSLGGLIHSAHPIVTDKEFLTLIPDLVKPGYLVVRMEPGSNERKVIGRVDCRGGSSPGWVHSFPVTEHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVEVPLFVTFHFINAYEEKDEDGRVTAFIADCCEHNSNPGILDKLRLQNLRSFNGNDVLPDARVGRFRIPLDGSPYGTLEAALDPNEHGRGMDMCSINPNYLGMKYRYTYACGAQRPCNFPNTLTKIDLESKRAKNWYEEGAVPSEPFFVPRPGATEEDDGVVISIISEKNGEGYALVLDGSTFEEVARAKFPYGLPYGLHGCWVPKQ 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04235 564 PANTHER BETA-CAROTENE DIOXYGENASE 86 562 IPR004294 GO:0016702
Vifa2g04235 564 Pfam Retinal pigment epithelial membrane protein 89 562 IPR004294 GO:0016702
Vifa2g04235 564 MobiDBLite consensus disorder prediction 59 80 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04235 K17913 - gmx:100814148 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04235 2 1244142059 1244145160 Vifa2g04235 2 1244142059 1244145160 ECH