Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04227 ATGGATCTAGGACTTTTTAGATTTCTATGTCAAGCAGAAACAAGAAGATTAGTTTCATTGTTAGGAGTAACCATAACTATACTTTTAGTTCTTCAATTTTCTGAACTTCCAAATAGTGAGTTTTTTTCTTCTCTTACTGCCAAAATCAAAAGTTTCACAATGGATACACCTTTGGTTAACTCTACAATAGAGACTCATAATGGAAATGTGAATTTATATGCTTCAAATTCGAGCTCAATTAGTCCTCAAACATCTTCATTAGATGAAGTTGCAAGTTTAGAAAAGGGTAAAGGAGTTGAAACTGTTGATGTTTTTAGAAATCATAGTTCACAAGAGAATCAATCTTCCTTGCTTGCACCACAACCTATGGTGCCTTTGTCCAATACATCATTCTTTGATTCAAAAGTGTATCCAAAGGATGGAATTTTGAGTTCTTTGCAACGTAGCAATGCGACGACCGTTAAAGATGCTTCTGCAATTTGGAAGAATTCCAAAAGGAGGCCTTCTAAAGTAGTTTCAATATCTGAAATGAACTTAATCTTGCAGCATAACCATGATTCTTCGCAGGGAGCGAAACCCGCGAGTTCTTCCGCTGTTAATGCGGAGATATTGAATGCAAAATCGGAGATTGAAAATGCGCCTATTGTTATGAATGATTCGAGACTTTACTCACCTTTATACCGGAATGTTTCCATGTTTAAAAGGAGTTATGAACTAATGGAGAAGATGTTGAAAGTTTTTATCTATCCGGACGGAGACAAGCCAATCTTCCACGAACCCTTATTGGAAGGAATATATGCGTCCGAAGGATGGTTTATGAAATCAATGGAAGGAAACAAACAGTTTACAACTCGAGATCCTGAGAAGGCTCACTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGTTAACTCTTTATGTACGTAATTCGCACAAACGTTCAAACCTAATCGAGTACATGAAAAACTATGTCGATATGATTGCTGGAAAGTACCCTTTCTGGAATAGAACTAATGGAACAGATCACTTCGTTGTTGCTTGCCATGATTGGGCTCCTGCAGAAACACGAGGGCGAATGCTAAATTGCATCAGAGCACTATGCAACGCTGACACTGAAGTAGGATTCGAGATCGGAAAAGATGTATCTCTTCCCGAAACATACGTTAGATCGGATGAGAATCCTCTCAAAAACATAGGAGGCAACCCTCCTTCTCAAAGGCCTATCCTCGCCTTCTTTGCAGGCGGTTTACACGGTTACGTCCGGCCTATGCTATTAAAGCTTTGGGAGAACAAAGAACCCGACATGAAAATCTCCGGCCCATTACCACACGTCAGAGGCAATAAAAACTACATCGAGCTCATGAAGAGTAGCAGATTCTGCATATGTGCAAGAGGTCACGAGGTTAATAGTCCACGCGTGGTCGAGGCGATATTCCACGAGTGTGTTCCTGTTATCATATCTGATAACTTTATTCCTCCTTTATTCGAGGTTTTGAATTGGGAGTCTTTTGCTGTGTTCATCAAGGAGAAACATATAGCGTATTTGAGAGATGTACTAGTTTCGATCTCGGAAGAAAGATACTTGGAAATGCATAAGAGGGTGAAAATGGTGCAAGAGCATTTTCTTTGGCATCATGAGCCTGTTAAGTATGATTTGTTTCACATGCTTCTTCATTCAATTTGGTATAATAGAGTTTTCTATACAAGTTAG 1713 0.39 MDLGLFRFLCQAETRRLVSLLGVTITILLVLQFSELPNSEFFSSLTAKIKSFTMDTPLVNSTIETHNGNVNLYASNSSSISPQTSSLDEVASLEKGKGVETVDVFRNHSSQENQSSLLAPQPMVPLSNTSFFDSKVYPKDGILSSLQRSNATTVKDASAIWKNSKRRPSKVVSISEMNLILQHNHDSSQGAKPASSSAVNAEILNAKSEIENAPIVMNDSRLYSPLYRNVSMFKRSYELMEKMLKVFIYPDGDKPIFHEPLLEGIYASEGWFMKSMEGNKQFTTRDPEKAHLFYIPFSSRLLQLTLYVRNSHKRSNLIEYMKNYVDMIAGKYPFWNRTNGTDHFVVACHDWAPAETRGRMLNCIRALCNADTEVGFEIGKDVSLPETYVRSDENPLKNIGGNPPSQRPILAFFAGGLHGYVRPMLLKLWENKEPDMKISGPLPHVRGNKNYIELMKSSRFCICARGHEVNSPRVVEAIFHECVPVIISDNFIPPLFEVLNWESFAVFIKEKHIAYLRDVLVSISEERYLEMHKRVKMVQEHFLWHHEPVKYDLFHMLLHSIWYNRVFYTS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04227 570 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 9 561 IPR004263 GO:0006486|GO:0016757
Vifa2g04227 570 Pfam Exostosin family 241 520 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04227 Vifa-Chr2 1239840291 1239842802 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04227 - - psat:127085356 1039.25