Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04226 ATGGATCTAGGACTTTTTAGATTTCTATGTCAAGCAGAAACAAGAAGATTAGTTTCATTGTTAGGAGTAACCATAACTATACTTTTAGTTCTTCAATTTTCTGAACTTCCAAATAGTGAGTTTTTTTCTTCTCTTACTGCCAAAATCAAAAGTTTCACAATGGATACACCTTTGGTTAACTCTACAATAGAGACTCATAATGGAAATGTGAATTTATATGCTTCAAATTCGAGCTCAATTAGTCCTCAAACATCTTCATTAGATGAAGTTGCAAGTTTAGAAAAGGGTAAAGGAGTTGAAACTGTTGATGTTTTTAGAAATCATAGTTCACAAGAGAATCAATCTTCCTTGCTTGCACCACAACCTATGGTGCCTTTGTCCAATACATCATTCTTTGATTCAAAAGTGTATCCAAAGGATGGAATTTTGAGTTCTTTGCAACGTAGCAATGCGACGACCGTTAAAGATGCTTCTGCAATTTGGAAGAATTCCAAAAGGAGGCCTTCTAAAGTAGTTTCAATATCTGAAATGAACTTAATCTTGCAGCATAACCATGATTCTTCGCAGGGAGCGAAACCCGCGAGTTCTTCCGCTGTTAATGCGGAGATATTGAATGCAAAATCGGAGATTGAAAATGCGCCTATTGTTATGAATGATTCGAGACTTTACTCACCTTTATACCGGAATGTTTCCATGTTTAAAAGGAGTTATGAACTAATGGAGAAGATGTTGAAAGTTTTTATCTATCCGGACGGAGACAAGCCAATCTTCCACGAACCCTTATTGGAAGGAATATATGCGTCCGAAGGATGGTTTATGAAATCAATGGAAGGAAACAAACAGTTTACAACTCGAGATCCTGAGAAGGCTCACTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGTTAACTCTTTATGCTCCTGCAGAAACACGAGGGCGAATGCTAAATTGCATCAGAGCACTATGCAACGCTGACACTGAAGTAGGATTCGAGATCGGAAAAGATGTATCTCTTCCCGAAACATACGTTAGATCGGATGAGAATCCTCTCAAAAACATAGGAGGCAACCCTCCTTCTCAAAGGCCTATCCTCGCCTTCTTTGCAGGCGGTTTACACGGTTACGTCCGGCCTATGCTATTAAAGCTTTGGGAGAACAAAGAACCCGACATGAAAATCTCCGGCCCATTACCACACGTCAGAGGCAATAAAAACTACATCGAGCTCATGAAGAGTAGCAGATTCTGCATATGTGCAAGAGGTCACGAGGTTAATAGTCCACGCGTGGTCGAGGCGATATTCCACGAGTGTGTTCCTGTTATCATATCTGATAACTTTATTCCTCCTTTATTCGAGGTTTTGAATTGGGAGTCTTTTGCTGTGTTCATCAAGGAGAAACATATAGCGTATTTGAGAGATGTACTAGTTTCGATCTCGGAAGAAAGATACTTGGAAATGCATAAGAGGGTGAAAATGGTGCAAGAGCATTTTCTTTGGCATCATGAGCCTGTTAAGTATGATTTGTTTCACATGCTTCTTCATTCAATTTGGTATAATAGAGTTTTCTATACAAGTTAG 1581 0.3896 MDLGLFRFLCQAETRRLVSLLGVTITILLVLQFSELPNSEFFSSLTAKIKSFTMDTPLVNSTIETHNGNVNLYASNSSSISPQTSSLDEVASLEKGKGVETVDVFRNHSSQENQSSLLAPQPMVPLSNTSFFDSKVYPKDGILSSLQRSNATTVKDASAIWKNSKRRPSKVVSISEMNLILQHNHDSSQGAKPASSSAVNAEILNAKSEIENAPIVMNDSRLYSPLYRNVSMFKRSYELMEKMLKVFIYPDGDKPIFHEPLLEGIYASEGWFMKSMEGNKQFTTRDPEKAHLFYIPFSSRLLQLTLYAPAETRGRMLNCIRALCNADTEVGFEIGKDVSLPETYVRSDENPLKNIGGNPPSQRPILAFFAGGLHGYVRPMLLKLWENKEPDMKISGPLPHVRGNKNYIELMKSSRFCICARGHEVNSPRVVEAIFHECVPVIISDNFIPPLFEVLNWESFAVFIKEKHIAYLRDVLVSISEERYLEMHKRVKMVQEHFLWHHEPVKYDLFHMLLHSIWYNRVFYTS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04226 526 Pfam Exostosin family 322 476 IPR040911 -
Vifa2g04226 526 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 9 517 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04226 Vifa-Chr2 1239840291 1239842802 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04226 - - psat:127085356 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04226 2 1239840291 1239842802 Vifa2g04226 2 1239840291 1239842802 ECH