Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04223 ATGGTTATGGCTATTTCATATAGTAATAATAATGCATTTATAGTAAATTGTTCCATTCAGAAAAGACCTTCTTATGTGTCAGAAAATTCTCATCACCATAATAATTTTCCACTCTTGTCTAACATGAAATCAACTCTACCTCAAGTCTCCTTGCAAATTGATGTTCTCAAAAGTATGAAAAATAGTATAGCAAAATTAGTTGATGTGTTTGTTGATTCATTCTTTGAATTCATTGATAAACCATTGCTTCCATCTAAGAGTAACTTTGCTCCTGTGGAAGAGTTAGGGGAAGCCTTACTTGTGAATAGCATTCAAGGACGAATTCCGAGTGATTTTCCGGAGGGCGTTTACATTAGAAATGGACCGAATCCACTTTTCGGAGGATTGAAATCAACAAATTCAATCTTTGGCAAGTCAAGTCACATTTGGGTGGAAGGAGAAGGAATGCTTCATGCAATGTATTTTCAAAAGTCAAGTCATGGAACCTGGAATGTTACCTACAACAACAAACACGTCGAAACCGAAACATACAACCTTGAAAAACATAGAAACAAACCATTGTTTCTTCCAGCCATTGAAGGCAATTCACTCGCCGTTTTGTCTGCTTATCTCTTCAACTGGTTGAGATCTGGAAAAGCAAACAAATACATTAGCAACACGAATGTGTTTGAGCATTCAGGAAAGTTTTACTCAGTTGCTGAAAGTCACATGCCACAAGAGATTGATATATTTTCCTTGAAAACTTTGAACAACTGGGAACTAGGTGCAGCTTGGAATCGGCCTTTTACGAGTCATCCAAAGAAAGCTCCAATTACAGGAGAGTTAGTAACATTAGGCGTGGAACCAATTAAACCTTTCGCCGTGGTTGGAGTTATTTCCGCTGATGGAAAGAAGTTGGTTCATAAAGTTGATATCAAACTAAACAGGTGTAGTCTTTGCCATGACATAGGTGTTACGCAAAGGTACAATGTGATCATGGATTTTCCACTAACCATTGATCTTATCAGACTTCTAAGAGGAGGCCAGTTAATAAAGTATGATAAGAAAGAATATGCAAGGATTGGAATAATGCCGCGCTATGGTAACGCCGACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACCTTTCACATTATCAATTCTTTTGAAGATGGAGATGAGGTTGTAGTTAGGGGATGCAGATCACTTGATTCTTTAATTCCTGAACCCAACCCGAATTCGAATGACTATGAATGGTTATCTCGTGGCTACGAATGGCGATTGAATATGAAAACCGGAGAGGTTAAGGAGAAAGATCTATGTGGTGAGAAAGTAGTTTACATGGATTTTCCAATGATCAATGAAAACTTTGTTGGTATTAAGCATAAATATGCTTACACACAAGTAGTTGATCCAACTGCAAACTCCACCACTCAAGATGTGCCAAAATATGGAGGTTTAGCTAAGCTATACTTAGAAGAATCATGTGAAGAGTTTTCTATGTCAATGGTAAAAGATGAAGGTATAAAGATGGAATATCATATGTTTGAGAAGAATACATATTGCAATGGAGCAGCCTTTGTGGCTAGAGATGGAGGTGTTGAAGAAGATGATGGTTGGATCATTACTTTTGTTCACAATGAAGATACGAACAAATCTCAAGTTCATATAATTGATACAAAGAATTTCTCTGGTCAGACAGTTGCCAAAATTGAATTGCCTTGTAGAGTTCCATATGGATTTCATGGAGCTTTCATGCCAATCTCATTCCAAGATCACTAG 1764 0.373 MVMAISYSNNNAFIVNCSIQKRPSYVSENSHHHNNFPLLSNMKSTLPQVSLQIDVLKSMKNSIAKLVDVFVDSFFEFIDKPLLPSKSNFAPVEELGEALLVNSIQGRIPSDFPEGVYIRNGPNPLFGGLKSTNSIFGKSSHIWVEGEGMLHAMYFQKSSHGTWNVTYNNKHVETETYNLEKHRNKPLFLPAIEGNSLAVLSAYLFNWLRSGKANKYISNTNVFEHSGKFYSVAESHMPQEIDIFSLKTLNNWELGAAWNRPFTSHPKKAPITGELVTLGVEPIKPFAVVGVISADGKKLVHKVDIKLNRCSLCHDIGVTQRYNVIMDFPLTIDLIRLLRGGQLIKYDKKEYARIGIMPRYGNADSIKWFEVEPNCTFHIINSFEDGDEVVVRGCRSLDSLIPEPNPNSNDYEWLSRGYEWRLNMKTGEVKEKDLCGEKVVYMDFPMINENFVGIKHKYAYTQVVDPTANSTTQDVPKYGGLAKLYLEESCEEFSMSMVKDEGIKMEYHMFEKNTYCNGAAFVARDGGVEEDDGWIITFVHNEDTNKSQVHIIDTKNFSGQTVAKIELPCRVPYGFHGAFMPISFQDH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04223 587 Pfam Retinal pigment epithelial membrane protein 91 581 IPR004294 GO:0016702
Vifa2g04223 587 PANTHER BETA-CAROTENE DIOXYGENASE 99 580 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04223 Vifa-Chr2 1238993736 1238996533 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04223 - - gmx:100817738 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04223 2 1238993736 1238996533 Vifa2g04223 2 1238993736 1238996533 ECH