Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04221 ATGCTTCATGCATTGTATTTTCAAAAATCAAGTCATGGAACCTGGAAAATCATCTACAACAACAAACACGTTGAAACCGAAACATACAATCTTGAAAAACAAAGAAACAAACCAATGTTTCTCCCGGCAGCAGAAGGCCATTCACTTGCCATTTTGTCTGCTTATCTATTGAACTGGTTGAGATCAGGCACAGTAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGTAAGTTTTACTCAATTGCTGAAAGTCACATGCCACAAGAGATTGATATATTTTCCTTGAAAACTTTGAACAATTGGGAACTCAGTGAAGCTTGGAATCGACCTTTTACAAGTCATCCAAAGAAAGCTCCAACTACAGAAGAGCTAGTTATATTTGGTTTTGCGCCAACTAAACCTTATGCTGTGGTTGGAATTGTTTCTGCTGATGGAAAGAAGTTGGTTCATAAAGTTGATATCAAACTAAACAGGTGTAGTATTTGCCATGACATAGGTGTTACGCAAAGGTACAATGTGATCATGGATTTTCCACTGACCATTGATCTTATCAGACTTCTAAGAGGAGGACCATTGATGAAGTATGATAAGAAAGAATACACAAGGATTGGTGTAATGCCTCGCTATGGTAATGCCGAGTCTATCAAATGGTTTGAAGTGGAACCTAATTGCACCTTTCATATTATCAATTCTTTTGAGGATGGAGATGAGGTTGTAGTGAGGGGATGCAGATCGCTTGACTCTTTAGTTCCTAAGCCTGACCCGTGTTCGAAAGAATTTGACTGCTTATCTCGTTCTTATGAATGGAGGTTGAACATGCGAACCGGAGAGGTCAAGGAGAAAGATCTTTGTGGTGACCAAGTTGTTTATATGGATTTTCCAATGATCAATGAAAACTTTGTAGGTATTAAGCATAGATATGCTTACACACAAGTAGTTGATCACATTGCAAGCTCTACCACTCAAGACGTGCAAAAGTATAGAGGTTTAGCAAAGCTATATTTTGAAGAAGCAAAGATAGAAAAAGATGAAGGTATAAAGATGGAATATCATATGTTTGAGAAGAATACATATTGCAATGGAGCAGCCTTTGTGGCTAGAGATGGAGGTGTTGAAGAAGATGATGGTTGGATCATTACTTTTGTTCACAATGAAGATACTAACAAATCTCAAGTTCATATAATTGATACAAAGAATTTCTGTGCTCAGACAGTTGTCAAAATTGAATTGCCTTGTAGAGTTCCATATGGATTTCATGGAGCTTTCATGCCAATCTCATTCCAAGATCACTAG 1302 0.3748 MLHALYFQKSSHGTWKIIYNNKHVETETYNLEKQRNKPMFLPAAEGHSLAILSAYLLNWLRSGTVNKYISNTNVFEHSGKFYSIAESHMPQEIDIFSLKTLNNWELSEAWNRPFTSHPKKAPTTEELVIFGFAPTKPYAVVGIVSADGKKLVHKVDIKLNRCSICHDIGVTQRYNVIMDFPLTIDLIRLLRGGPLMKYDKKEYTRIGVMPRYGNAESIKWFEVEPNCTFHIINSFEDGDEVVVRGCRSLDSLVPKPDPCSKEFDCLSRSYEWRLNMRTGEVKEKDLCGDQVVYMDFPMINENFVGIKHRYAYTQVVDHIASSTTQDVQKYRGLAKLYFEEAKIEKDEGIKMEYHMFEKNTYCNGAAFVARDGGVEEDDGWIITFVHNEDTNKSQVHIIDTKNFCAQTVVKIELPCRVPYGFHGAFMPISFQDH 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04221 433 Pfam Retinal pigment epithelial membrane protein 1 427 IPR004294 GO:0016702
Vifa2g04221 433 PANTHER BETA-CAROTENE DIOXYGENASE 1 426 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04221 Vifa-Chr2 1237572574 1237574666 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04221 - - gmx:100817738 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04221 2 1237572574 1237574666 Vifa2g04221 2 1237572574 1237574666 ECH