Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04215 ATGGAGTTTCTTGCTAGATCATGGAGTCTTTCTGCCACGGAACTATCCAAAGCACTACATAGCACCAATACTACGACGTCCTCGGCTATTGAGATGCAACTTCTATGCCACTCTGATCAGTTCAAGGCCAAAGGTTTCACTGCCTCTAAGGATTCTTTATCTATCGGGTGTTATCCTCAGATTTCGCCAAATGAAAGTAGCGAAACAAAGGATTTACTTTTACTTCATCAAGCACTTTCTACAGACTTCATTTCGAGTCAAAACTTGCTGAGAAACGGGCTCTATAGGAGCTTGATGAGAGGGAAGACAACAGGTAGGTGGTTGAAAGATCAGAAGGAGAGGAAAAAGCAAGAAATTAGGACTCATAATGCTCAGCTGCACGCAGCAGTATCTGTAGTTGGTGTTGCTGCCGCTGTTGCAGCAGTCGCTGCTTCAATAGCATCGTCCGAAAAGCCTAATGCCATGGCTTCTGCTGCAGTTGCTTCTGCGGCTTCTTTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACAGGACCAGATCGTAACCGCAGTCGACTCAGCTATTAACGCAAAAACCAATGGAGATATTATGACTCTTACAGCTGGAGCAGCCACAGCCTTGCGAGGAGCGGCTACTCTAAAGGCGCGTCTGGAGAGGGGGATTGGAGCTACTACGATTCCTCCGGTTGAGGAGAAGTGCGGCGAAGCCAAAGAGGCAAACATCTTGATAGCACTGGACTTTGTCTTTAGAGGAGGTGTACTACTCAAACGTACAAGAAAAGGAGTTCTTCACTGGAAGCAAGTTTCTTTCAATATTAATTCAAATTTTCAGGTAGTAGCGAAAATGAAAAGCAAGCATATTGCAGGAACATTCACGAAAAAGAAGAAATATATAGTCACTGGAGTGTGCAGTGATATCCCAGCTTGGCCCGGAAGGGAAGACAGTTGCAAAAAGAGAGCGTATTTTGGAATAAAAACAGCAGAGAGATTAATAGAATTTGAATGTGTAAGAAAAGGAGACAAACTGTTGTGGTTAGAAGGAATCCAGTACATGTTGAATTGCCGCGCCAAAGTGACATACTAG 1098 0.4435 MEFLARSWSLSATELSKALHSTNTTTSSAIEMQLLCHSDQFKAKGFTASKDSLSIGCYPQISPNESSETKDLLLLHQALSTDFISSQNLLRNGLYRSLMRGKTTGRWLKDQKERKKQEIRTHNAQLHAAVSVVGVAAAVAAVAASIASSEKPNAMASAAVASAASLVASHCIEIAEDMGAEQDQIVTAVDSAINAKTNGDIMTLTAGAATALRGAATLKARLERGIGATTIPPVEEKCGEAKEANILIALDFVFRGGVLLKRTRKGVLHWKQVSFNINSNFQVVAKMKSKHIAGTFTKKKKYIVTGVCSDIPAWPGREDSCKKRAYFGIKTAERLIEFECVRKGDKLLWLEGIQYMLNCRAKVTY 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04215 365 PANTHER EXPRESSED PROTEIN 1 361 IPR040269 -
Vifa2g04215 365 Pfam Auxin canalisation 1 236 IPR008546 -
Vifa2g04215 365 Pfam Plant pleckstrin homology-like region 259 360 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04215 Vifa-Chr2 1237285693 1237287472 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04215 - - psat:127084614 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04215 2 1237285693 1237287472 Vifa2g04215 2 1237285693 1237287472 ECH