Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04188 ATGGTGTTCTACTTCAAAGCACGCCCTGAAGCTGGCGATTACACCATCTTCATGGGCCTTGACAAGTTCGAGAATGAAGAGCTCATCAAATACGGTTTCATTGAAGACATATGGTTCCATGTTGACAAGATGTCTTCAGCCCATGTTTATGTCAGGCTGCACAAAGGTCAGACTATTGATGACATGAGTGAAGGTTTATTGGAAGATTGTGCTCAACTTGTCAAAGCAAATTCCATTCAAGGGAATAAAGTAAACAATGTCGATGTTGTTTACACTCCCTGGTCCAATTTAAAGAAAACTGCTTCGATGGATGTTGGTCAAGTTGGTTTTCACAATGGAAAAATGGTGCGAACTGTGAGAGTGGAGAAGAAGATAAATGAGATTGTTAACAGGCTAAACAAGACGAAGGTGGAAAGGAAACCTGATTTGAAAGCTGAGCGCGAAGCAGTTAATGCAGCTGAAAGAGCTGAGAGAAAACATCAACTGAGGGAAAAGAAACGCCGAGAGGAAATGGATAGACTCGAAAAGGAGAAACAATCAGAGCTTAGGAGCTACAAGGGTTTGATGGTCTCAGAAAATATGACATCCAACAAAGATATTGCATCAGGAAGCAAATCATTCCAGGAAGTGGAGGAGGATTTCATGTAA 648 0.4136 MVFYFKARPEAGDYTIFMGLDKFENEELIKYGFIEDIWFHVDKMSSAHVYVRLHKGQTIDDMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNGKMVRTVRVEKKINEIVNRLNKTKVERKPDLKAEREAVNAAERAERKHQLREKKRREEMDRLEKEKQSELRSYKGLMVSENMTSNKDIASGSKSFQEVEEDFM 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04188 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
Vifa2g04188 215 Coils Coil 157 179 - -
Vifa2g04188 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Vifa2g04188 215 MobiDBLite consensus disorder prediction 143 183 - -
Vifa2g04188 215 MobiDBLite consensus disorder prediction 143 215 - -
Vifa2g04188 215 MobiDBLite consensus disorder prediction 189 204 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04188 K26405 - gmx:100802228 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04188 2 1228803306 1228807590 Vifa2g04188 2 1228803306 1228807590 ECH