LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa2g04178	ATGGACTATTGTGTAAGAGAATTAGAAGGAAAACAAGCTCATGATCCTTTATTCATGAAGAAAATGAACAAAGATAAATCATCGTCCTCCTCGACCGATCTTCCTCGTCGCGTGTTTGTTCATGGACCTGTGATTGTAGGAGCAGGACCATCAGGTTTAGCAGCAGCAGCATGTCTCAAAGAAAAAAACATTCCATCCATAATTCTAGAAAGATCCAACTGCATAGCTTCATTATGGCAACTCAAAACCTACGACCGACTCCGTCTTCACCTCCCTAAACAATTCTGCGTCTTACCCTTCATGGAGTTCCCTTCAAACTTCCCTACCTACCCTTCAAAACAACAATTCATAAAATACCTCGAGAATTACGCAGAAAGGTTTCATATTACTCCAAAATTCAATGAGACAGTTCAACAAGCGGAATTCAATACTAAAACCGGTTGTTGGAAGGTGAAGAGTCTTAACAGTAAAGGCGATGTCACTACCGAGTATGTTTGTCGGTGGTTGATCGTTGCGACCGGAGAAAATGCCGAGGCTGTTGTGCCTAATATTGAAGGTGCAGATGAGTTTGAAGGAGTTATAAGACATACTAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAAAGAGTTTTGGTTGTTGGTTGTGGAAATTCTGGTATGGAAGTTTGTTTGGATCTTTGTAACCATCATGCTACTCCTTCTCTTGTTGTTAGAGATTCAGTACACGTTCTACCACGAGAGATGCTAGGAAAATCAACTTTTGGGTTGTCCATGTGGTTACTAAAGTGGTTTCCATTGAAACTTGTCGATCGATTCTTGCTCTTAGTCTCATGGCTTTTGCTTGGTGACACTTCTCAACTTGGTTTGGATCGTCCTACTTTGGGTCCCCTTCAACTCAAAAACCTCACGGGAAAAACTCCTGTCTTGGATGTGGGTACCCTTGCCAAGATTAAAGCTGGTCACATTAAGGTAAGGCCAAGCATAAAGAAGTTAAAACGTCATACAGTGGAATTTGTAGATGGAGGATCAGAGAATTTTGATGGCATCATATTGGCAACTGGTTACAAAAGTAATGTACCCTTATGGCTCAAGGAAGAGGATATGTTTTCCATGAAAGATGGATTTCCTATGAAGCCATTTCCAAATGGGTGGAAAGGTAAAAATGGTCTCTATGCAGTAGGATTTACAAAAAGAGGACTATTAGGTGCATCAATGGATGCAAAAAGAATAGCTGATGACATTGAACAATGTTTAAAAGCTGAGGCAAAACATGGACCATAA	1284	0.4042	MDYCVRELEGKQAHDPLFMKKMNKDKSSSSSTDLPRRVFVHGPVIVGAGPSGLAAAACLKEKNIPSIILERSNCIASLWQLKTYDRLRLHLPKQFCVLPFMEFPSNFPTYPSKQQFIKYLENYAERFHITPKFNETVQQAEFNTKTGCWKVKSLNSKGDVTTEYVCRWLIVATGENAEAVVPNIEGADEFEGVIRHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHHATPSLVVRDSVHVLPREMLGKSTFGLSMWLLKWFPLKLVDRFLLLVSWLLLGDTSQLGLDRPTLGPLQLKNLTGKTPVLDVGTLAKIKAGHIKVRPSIKKLKRHTVEFVDGGSENFDGIILATGYKSNVPLWLKEEDMFSMKDGFPMKPFPNGWKGKNGLYAVGFTKRGLLGASMDAKRIADDIEQCLKAEAKHGP	427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa2g04178	427	SUPERFAMILY	FAD/NAD(P)-binding domain	207	419	IPR036188	-
	Vifa2g04178	427	PRINTS	FAD-dependent pyridine nucleotide reductase signature	210	228	-	-
	Vifa2g04178	427	PRINTS	FAD-dependent pyridine nucleotide reductase signature	43	62	-	-
	Vifa2g04178	427	Pfam	Flavin-binding monooxygenase-like	45	363	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Vifa2g04178	427	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	206	230	-	-
	Vifa2g04178	427	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	42	64	-	-
	Vifa2g04178	427	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	44	424	-	-
	Vifa2g04178	427	SUPERFAMILY	FAD/NAD(P)-binding domain	44	249	IPR036188	-
	Vifa2g04178	427	FunFam	Flavin-containing monooxygenase	43	424	-	-
	Vifa2g04178	427	Gene3D	-	42	422	IPR036188	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa2g04178	Vifa-Chr2	1223998538	1224001915	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa2g04178	K11816		-	gmx:100799546	709.523