Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04167 ATGGCGCCTTCGAAGCTCTTCGTCTTCGCTCTTTCCGTTGCCCTAATTTTCGTCTTCGGTACTTCCGAAGTCGACGTTTCCATCGATGATTCCGATTCATCTTCTCTCAAGATCCAATTAGATCAACTCAATACCAAGATCCAATTTCTCGAGTCTCAAATCAGTGAGAAGTCACAAGAATTGAAGAAGAAGGATGAGATAATAGCAGAGAAAGAAAAGCTTTTCAATGATAGGTCTAGTGCTATTCAATCGTTACAGAATGAGGTTGCTTCTCTCCAGAAAAAAGGATCATTGGATGCTGAGGAGCGGGTTGTAAAGGCACATGCACGTGCTGAGGAACTACAGAAGCAGGTGGACAAGCTTAAAAGTGATCTTGACAAACAAAACAGTGAGAAAGGGAACTGGGAAACTCGGGTAGATGAGTTAGAGAAAAAGATTCATGTTTTGAACTCAAAATTAGAGAAGATTCAAAAGATAAATGAGGAACAGAAGAAACAAATCCGCAAAACTGAACGCGCTCTTAAAGTTGCTGAGGAAGAAATGTTGAAGGCAAAGCTAGAGGCAACTTTCAGAGCAAAAGAGCTGAGCGAGACTCATGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTATCTTCGTAGTAAGTCCGTGGTTGAGACTCATTGGAATGAACATGGGAAGCCTCTATTGGAAGTGATAACTCAAAAGGCCCTAGAGAAAAAGGCACAAGCTGGAAAGTGGGCTGAACCTCATTTGGAAACAGTTAAAACTAAATGGATCCCAACTGTGAATGAACATTTGTCTGTGGTGAAAACAAAGGTTGAACCTCATGTTCAACTACTGACTACAAAGACTGTTGAAGCTTACAAGTCCTCAAAGGAAGCACTTACTCCCCACTTAAGCAAGGGATTAGAATGTGTAGACCCTTATTATCAGGAAGTTCGAAAGTTTAGCAAGCCATACATTGATCAGGTCGCTACTGCAGCGAAGCCTCACGTCAAGAAAGTACAAGTAGTTTTGAAGCCTTACACAAAGAAGGTTGTTCATGCTTATGGGAATTTCTTGGAATCAGCCACTGCATATCATAGCCAGGTCCAAGCTACTGTCCAGGAGACACTGAAAAAACACGAACTTACTAGACCTCTTGCTACTAAAGAATTGGAATGGTTTGCGGCCTCTGCTCTTTTGGCCTTGCCTATTATTTTACTAGCTAGAGTTTTTTCAGCCATTTTCGGCAGCAAAAAGGCGGTTAAACCTGCTCGAAGTGGAAACAGCCACCATGCTCGTCGTAAAGCTAAGCGAGGTCATTCAGACAAGTAG 1320 0.4258 MAPSKLFVFALSVALIFVFGTSEVDVSIDDSDSSSLKIQLDQLNTKIQFLESQISEKSQELKKKDEIIAEKEKLFNDRSSAIQSLQNEVASLQKKGSLDAEERVVKAHARAEELQKQVDKLKSDLDKQNSEKGNWETRVDELEKKIHVLNSKLEKIQKINEEQKKQIRKTERALKVAEEEMLKAKLEATFRAKELSETHGAWLPPWLAVHYLRSKSVVETHWNEHGKPLLEVITQKALEKKAQAGKWAEPHLETVKTKWIPTVNEHLSVVKTKVEPHVQLLTTKTVEAYKSSKEALTPHLSKGLECVDPYYQEVRKFSKPYIDQVATAAKPHVKKVQVVLKPYTKKVVHAYGNFLESATAYHSQVQATVQETLKKHELTRPLATKELEWFAASALLALPIILLARVFSAIFGSKKAVKPARSGNSHHARRKAKRGHSDK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04167 439 Coils Coil 97 187 - -
Vifa2g04167 439 PANTHER OS08G0519400 PROTEIN 27 434 - -
Vifa2g04167 439 MobiDBLite consensus disorder prediction 419 439 - -
Vifa2g04167 439 Gene3D Apolipoprotein 227 388 - -
Vifa2g04167 439 Gene3D - 30 200 - -
Vifa2g04167 439 Coils Coil 33 67 - -
Vifa2g04167 439 SUPERFAMILY Apolipoprotein A-I 197 370 - -
Vifa2g04167 439 MobiDBLite consensus disorder prediction 420 439 - -
Vifa2g04167 439 SUPERFAMILY Tropomyosin 36 198 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04167 - - gmx:100781922 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04167 2 1219208922 1219213859 Vifa2g04167 2 1219208922 1219213859 ECH