Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04146 ATGACTTGGTGGGAAGGCGTTCATGAATCTCGCGTTCTCGTTGCCCCCGATCCTGGCACCGATGGAAACGGTTCCGGACAAATGATATCGCTTCGTCATCCCAAATCTGGAAATGCAACACAATATCTCTTTGTAAATGGAATGCTTCAAGAATTTCAATGGTTTAAGAATTTGTATGGTTCTTGGTTTTTGGGAGATTATACAAGTGAAGATGGTCGACTGTATTTATCCACGCCTGTTGATCCTGTTTTCATCATGCTTCCCATATTTGAGGAAGCTAGAATGAAGAAAGGCGATGATCTTGGTAAGTTCAGGCAATTGGATGAGATGTTGTTCATTGATGGGTATCCAGGATATCAGCAGTTAATGTCGCTTGTGGAGAACTGTATGCAAGTAGTTTGTGAAGTCAAAGAAGTTGGATCCTTAAAATTCTTTAGACTCGATGACACGAAGGTTCTACGTTGGCTTTGCTATAAGGTTTCTCAGCTGAAACAGACACTACCCAAGTTGGACAAAAACTACGCTGTTCAATCAGAGAAAGACACTTTGGTTGACGCAGTTTCAATATTAGGAGAGTATTTAAATGAAGATCATTGGTTGCAGCCTTTGTGTAACCATCTTAAGTTAAATATACTTGAGGTGACAGGAAAATTACAAGCAAATGCTGAGGAAAGTAAACCTGGTTTGTGTAATGATGTATTCCAGGAGGAACAGAGTGATGATAAGAAGGCTACAATTGTGAAGAAGGGTAGACAAGCAAAGAAAATAAAACTTGAGACAGAATCACATAACATCAGAGATATGTTTTCTAGGGCCTCCAGAAAGAAAAACTAA 834 0.3957 MTWWEGVHESRVLVAPDPGTDGNGSGQMISLRHPKSGNATQYLFVNGMLQEFQWFKNLYGSWFLGDYTSEDGRLYLSTPVDPVFIMLPIFEEARMKKGDDLGKFRQLDEMLFIDGYPGYQQLMSLVENCMQVVCEVKEVGSLKFFRLDDTKVLRWLCYKVSQLKQTLPKLDKNYAVQSEKDTLVDAVSILGEYLNEDHWLQPLCNHLKLNILEVTGKLQANAEESKPGLCNDVFQEEQSDDKKATIVKKGRQAKKIKLETESHNIRDMFSRASRKKN 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04146 277 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 84 173 IPR019024 -
Vifa2g04146 277 FunFam Ribonuclease H2 subunit B 9 79 - -
Vifa2g04146 277 Gene3D - 8 79 - -
Vifa2g04146 277 Gene3D - 80 208 - -
Vifa2g04146 277 Pfam Ydr279p protein triple barrel domain 27 81 IPR041195 -
Vifa2g04146 277 CDD RNase_H2-B 12 165 IPR040456 GO:0032299
Vifa2g04146 277 PANTHER RIBONUCLEASE H2 SUBUNIT B 2 275 IPR040456 GO:0032299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04146 Vifa-Chr2 1210312133 1210315223 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04146 K10744 - gmx:100305835 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04146 2 1210312133 1210315223 Vifa2g04146 2 1210312133 1210315223 ECH