Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04144 ATGGCAGGGTTGAATTTTGAAGCTGAATATGTTGCTAGCTTTGATGTTCTCAAAGTTTTTGAAGCTCGTGGTGTTGAGTTTCTCTTATCTTCTCAAGGAAAGGTACCTTTGTTAGATTTGAATGGAAAAATCATCTGTCTATTTTTCTCTGCCAACTGGTGTAGACCTTGCAAGCTTTTCATTCCTCATCTTGTCGATCTTTATGAAACACTGAGGAAGAGAGGGGTAAATATAGAGATTATCTTCATCTCTTTTGATCGTGATGAGGACGCATTTAATGAACACGTCAAGAGTATGCCGTGGCTAGCCGTTCCGTTTGATGTGAGTTTGCATAGGAAGTTTATTGATAGATATCGGATTGATCGAATCCCGTCGTTCGTTCCGTTATGTTCTGATGCCTTAACTGTTGATGAAAAAGTGATTGAGTGGATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAAGAAGAGACACGACGAATTGAAAGACATAGATAGAAGAAAACGCGAACAAGTGAATTTGCAAGAATTGTTGGCACGCCAGGGACGCGACTTTCTTATTGCTGGAAATGATAGAAAGGTGGTTGTATCTGAACTAGCCGGGAAAATGGTAGGCCTATTTTTCGGCGCATATTGGTCTCCTCCTTGCCGCGCCTTCACAGTTCAACTCACCGATGTATACAATAATCTCAACGATACAAAAGGTCGCTGCTTCGAGATTGTTTTCATTTCAACTGATAAGGACCTGAAAGAATTCAATGTTAACAGAACTAGCATGCCTTGGCTTTCTATCCCATATGAAGACAGAACAAGGCATGACCTTTGTAGAATCTTCGAGATAAAGAAAATTCCGGCTTTGGTCTTCATTGGACCAGATGGAAAAGTCATTAGTTTGAATGGTAAGTTTATGGTCTCCTCATACGGCGCAGAAGCTTTCCCGTTTACCGAATCAAGGGTTAAAGATTTAGAATCGGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCAACAGGTTCAGGATGTCAAGCATGAACATGTACTCAAATTGGAAATGGCGAAAGCGTATGTATGCGATTCTTGTAAGAAACAAGGCAAGTTCTGGTCATTCTTTTGTGATGTTTGTGACTATGATCTTCATCCAAGTTGTCTTGAGAAAGTCAACAAAGACTAA 1170 0.406 MAGLNFEAEYVASFDVLKVFEARGVEFLLSSQGKVPLLDLNGKIICLFFSANWCRPCKLFIPHLVDLYETLRKRGVNIEIIFISFDRDEDAFNEHVKSMPWLAVPFDVSLHRKFIDRYRIDRIPSFVPLCSDALTVDEKVIEWIEDYGADAFPFTKKRHDELKDIDRRKREQVNLQELLARQGRDFLIAGNDRKVVVSELAGKMVGLFFGAYWSPPCRAFTVQLTDVYNNLNDTKGRCFEIVFISTDKDLKEFNVNRTSMPWLSIPYEDRTRHDLCRIFEIKKIPALVFIGPDGKVISLNGKFMVSSYGAEAFPFTESRVKDLESALRKEGEALPQQVQDVKHEHVLKLEMAKAYVCDSCKKQGKFWSFFCDVCDYDLHPSCLEKVNKD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04144 389 SUPERFAMILY Cysteine-rich domain 334 384 IPR046349 -
Vifa2g04144 389 ProSiteProfiles Thioredoxin domain profile. 16 149 IPR013766 -
Vifa2g04144 389 Pfam Thioredoxin-like 202 296 IPR012336 -
Vifa2g04144 389 Pfam Thioredoxin-like 42 127 IPR012336 -
Vifa2g04144 389 Gene3D Glutaredoxin 179 317 - -
Vifa2g04144 389 ProSiteProfiles Thioredoxin domain profile. 151 325 IPR013766 -
Vifa2g04144 389 SUPERFAMILY Thioredoxin-like 190 297 IPR036249 -
Vifa2g04144 389 PANTHER THIOREDOXIN 9 350 - -
Vifa2g04144 389 SUPERFAMILY Thioredoxin-like 33 132 IPR036249 -
Vifa2g04144 389 Gene3D Glutaredoxin 21 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04144 Vifa-Chr2 1210226260 1210227642 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04144 K17609 - gmx:100778160 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04144 2 1210226260 1210227642 Vifa2g04144 2 1210226260 1210227642 ECH