Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04141 ATGGAGATCCGTGCCGATGCAGAAACCAGTTCTTTTTCTTCTAGCAGTTTGTTTGCTGCGGTTTCTTATGGATTTGCTTCAATGGCGATGGTTTTTATCAATAAAGCTGTTCTTATGCAGTATACGTATTCAATGACTTTACTCACTTTGCAGCAACTATTTACTACTCTGCTTATACACCTTGGTCGAAAAATGGGATACACAAGAGCTAGAGGAGTGGATATGGAAACAGCCAAGCAGCTGTTCCCAGTTTCATTTTTCTATAATGCCAATGTTGCATTTGCTTTGGCCAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCAATAAAGAGGCTTACACCACTTGCTGTACTTATTGCTGGATGTTTCATGGGGAAGGGGAGACCTACAACTCAGGTGACTCTCTCAGTGATATTGACTGCTGCTGGAGTTCTAATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCTTGGCTTTCATTTCTGTTTTCTTCCAGACGATGTACCTTGTACTAGTGGAAAAATCTGGTGCTGAGAAAGGACTTTCATCAGTGGAAATCATGTTCTACAACAGTTTTTTATCTCTTCCATTTTTGATGTTTCTTATTATAGCTACAGGGGAATTCCCATATTCTTTATCTGTATTATTTGCAAAGAGTTATTCTTTTACATTTTTGATGATCCTTATTCTTTCATTGGTGATGGGCATTGTTCTCAACTTCACCATGTTCTTGTGCACTATTGTTAATTCTGCTTTAACTACAACTATTGTGGGCGTTCTTAAAGGAGTTGGTTCCACGACCTTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTAAATGTGACTGGATTGGTTATCAATACAGCTGGTGGTGTGTGGTATTCATATGCTAAATATCAGCAGAAAAAAAGTAAGACAGTGAAGCTAGTTACAGATGTGGAGGCTCATCGTAAATAG 978 0.3885 MEIRADAETSSFSSSSLFAAVSYGFASMAMVFINKAVLMQYTYSMTLLTLQQLFTTLLIHLGRKMGYTRARGVDMETAKQLFPVSFFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGCFMGKGRPTTQVTLSVILTAAGVLIAALGDFSFDLFGYSLAFISVFFQTMYLVLVEKSGAEKGLSSVEIMFYNSFLSLPFLMFLIIATGEFPYSLSVLFAKSYSFTFLMILILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVGSTTFGFFLLGGVQVHALNVTGLVINTAGGVWYSYAKYQQKKSKTVKLVTDVEAHRK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04141 325 PANTHER SOLUTE CARRIER FAMILY 35 17 309 - -
Vifa2g04141 325 Pfam Triose-phosphate Transporter family 25 302 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04141 Vifa-Chr2 1209234028 1209236738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04141 4 324 Lipid Metabolism Gene Families AT5G19980 25.664 7.10e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04141 K15281 - gmx:100777622 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04141 2 1209234028 1209236738 Vifa2g04141 2 1209234028 1209236738 ECH