Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04127 ATGGTGGTTGTGGAAGGTGAAAACGAAAACGAAAACGAAAACAACAAGGAGCATGAAGAACTGATTCCAGGTTTACCAGATGAAATAGCTGAGATTTGTCTTCTTCGTGTTCCTTACCCATATCAGCCTCTAGTACGCTGTGTTTCTTCGACATGGAACAAAGCAATATCCAATCCATCTTTTCTACTCTCCAAGAAAAACCTTTTGAATCAGAATCCACATCTCTTTGTGTTAGGTTTTCATACAGTAACCTCGAAGCTCCAATGGCAATCGTTGGATCCTTCTTCTAACCGTTGGTTTATACTTCCTCAGATGCCTCTCCCGAACGACACCGTTTGCTCAACCTCATTCGCCTCCGCTTCTTTGCCGAGTCAGGGGAAGATATTCGTCATGAGAGGAACGTCGACAGTCGTTTACCGTACAGCGGTCAACCAATGGTTGACGGCGTCTGATATGATATCGGAGAAATCTTACTTCGCGGCGGAGGAAGTGAACGGAAGAATCGTGACCGTTGGTGAGAGCGGTACGGAAATCTATGATCCGGAGACTAACACGTGGAGGAGAGGTATGAAGTTTCCAGGGCAGTTGGAGAGATATGAAACGGTGGTTAACGGTGGGAAGATGTACGTAACGGAAGGTTGGTGGTGGCCGTTTGCGGTTAGGCCGAGAGGTTGGGTTTATAAATTAAAGAATGACACGTGGCGTGAGATGAGTGAGGGAATGAAAGACGGTTGGGCTGGGGAGAGTGTTTCGGTGTGTGGCAGAGTGTTTATGATACCAGACGTTGATTTACCGATGAAAGTTTACGATGAAAATACCGACACGTGGCGTTGTGTGACTGGTGAGAGGCTACCGAGAGATAAACTTAAGAAACCGTTTGTTGTGAGAGGATTAGGTGATAGAATATACGTGGCGTCGCTTGGTTTGAAAGTGGCGATTGGTACGGTTGTTGATGATGACGTGGCTGGTGTGATGGTGACGTGGCAGGTAATGGATGCACCGGAAGCGTTTAGAGAATTCTCACCTTGTAGTTGCCAGGTGGTGTATGCTTGA 1053 0.4682 MVVVEGENENENENNKEHEELIPGLPDEIAEICLLRVPYPYQPLVRCVSSTWNKAISNPSFLLSKKNLLNQNPHLFVLGFHTVTSKLQWQSLDPSSNRWFILPQMPLPNDTVCSTSFASASLPSQGKIFVMRGTSTVVYRTAVNQWLTASDMISEKSYFAAEEVNGRIVTVGESGTEIYDPETNTWRRGMKFPGQLERYETVVNGGKMYVTEGWWWPFAVRPRGWVYKLKNDTWREMSEGMKDGWAGESVSVCGRVFMIPDVDLPMKVYDENTDTWRCVTGERLPRDKLKKPFVVRGLGDRIYVASLGLKVAIGTVVDDDVAGVMVTWQVMDAPEAFREFSPCSCQVVYA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04127 350 CDD F-box_AtAFR-like 21 61 - -
Vifa2g04127 350 SMART fbox_2 25 65 IPR001810 GO:0005515
Vifa2g04127 350 Gene3D - 62 320 IPR015915 GO:0005515
Vifa2g04127 350 SUPERFAMILY Kelch motif 73 305 IPR015915 GO:0005515
Vifa2g04127 350 Coils Coil 1 21 - -
Vifa2g04127 350 PANTHER OS02G0202900 PROTEIN 12 345 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04127 Vifa-Chr2 1205580232 1205581284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g04127 25 253 Miscellaneous Gene Families AT4G33900 21.887 3.47e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04127 - - mtr:11433037 500.36