Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04028 ATGAAACTATTTACCCTTGTAATAATTTCAAGCCTATTACTCAAACAAGCAACTCTAATTCTTGCAGATGTTGGTACTGCTGCTTCTTATGGACCTCCATATATACCTACTTCTTGTGATGGAAGTAGGAGAGAGCAGTTTCCACCAGGCAACATATTTGTGGCAGTGAATGAAGGATTATGGGATAACGGCGCAGCATGTGGAAGAAGATATAGAGTGAGATGTGTGAGTGGAATCAATAAGCCATGCAAAGGAGGTAGTATTGATGTTAAAGTTGTTGATTCTATTACTTGTACAAAGTCTTCATGTCCCCACACTTTTCACATGTCAATCGAAGCCTTTTCAGCAATCTCACGTTTCCTTAATGCAAATATCAATATTGAATATATTCAGATATGA 399 0.3759 MKLFTLVIISSLLLKQATLILADVGTAASYGPPYIPTSCDGSRREQFPPGNIFVAVNEGLWDNGAACGRRYRVRCVSGINKPCKGGSIDVKVVDSITCTKSSCPHTFHMSIEAFSAISRFLNANINIEYIQI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04028 132 Gene3D - 23 132 IPR036908 -
Vifa2g04028 132 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 132 IPR007112 -
Vifa2g04028 132 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 131 - -
Vifa2g04028 132 SUPERFAMILY Barwin-like endoglucanases 21 129 IPR036908 -
Vifa2g04028 132 CDD DPBB_EG45-like 23 129 - -
Vifa2g04028 132 Pfam Lytic transglycolase 55 129 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04028 Vifa-Chr2 1181258753 1181259386 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04028 - - gmx:100792215 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04028 2 1181258753 1181259386 Vifa2g04028 2 1181258753 1181259386 ECH