Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03979 ATGGCTTTCAACAAATTGTCTTTCATAATTAGTGTGCTTTCTCTTCTTTCTTACTCAACAATGTTCTCTTATGCTCATCAAAGTTCTCCACCATCACCAAACCCAACTCCTTGCCCTACTGCTCCACCATCACCATCACCATCACCAAGCCCAACACCTTCACCCAAAGGTCAATGCCCCATAGACACTTTAAAGTTAGGGGTTTGTGCTAATCTCTTAGGATTAATTACTATCGGAAAACCTCCATTGGGTAGCAAATGTTGTGCATTAATCGACAAATTGGTTGATTTAGAAGCCACAGTCTGTCTTTGTATCGCACTCAAGGCGAATGTGCTTGGAATCAACTTAAACATACCTCTTGATCTCAGCTTGATCATTAGTGCTTGTCAAAAAACCGTTCCTCCTAAATTCAAATGTGCCTAA 423 0.4066 MAFNKLSFIISVLSLLSYSTMFSYAHQSSPPSPNPTPCPTAPPSPSPSPSPTPSPKGQCPIDTLKLGVCANLLGLITIGKPPLGSKCCALIDKLVDLEATVCLCIALKANVLGINLNIPLDLSLIISACQKTVPPKFKCA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03979 140 Gene3D - 58 140 IPR036312 -
Vifa2g03979 140 MobiDBLite consensus disorder prediction 31 57 - -
Vifa2g03979 140 MobiDBLite consensus disorder prediction 31 56 - -
Vifa2g03979 140 Pfam Hydrophobic seed protein 59 140 IPR027923 -
Vifa2g03979 140 SMART aai_6 59 139 IPR016140 -
Vifa2g03979 140 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 61 139 IPR036312 -
Vifa2g03979 140 PANTHER - 12 139 - -
Vifa2g03979 140 CDD HPS_like 57 139 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03979 Vifa-Chr2 1170247705 1170248127 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03979 50 139 Acyl Lipid Metabolism Gene Families AT4G22490 34.783 7.65e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03979 - - gmx:100306307 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03979 2 1170247705 1170248127 Vifa2g03979 2 1170247705 1170248127 ECH