Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03974 ATGGAGATTCGTTATGGAAAATTGTTTTCTCCGATTTTGATATTGCTCTTACTAGCTTCATTTGTAGTGATTTTCATTGCGCTTCCTTCGAATTTGACGAGATTCATCGTCAACTTGAAGCCGACATTCTCGATCTCACTGCAAAACTTGCGAACAAAAGTTTCCGGTGAAGACGATATCCTCCTCGCCGTTGAACACGCCGGTGATCACTCAAACAGCACCTTAAAGAGTGAGGTGAGAAAAGTGATCAAGAGTAAGGAAGAGAAGCGAGAAGAAGAACTCGCTCGAGCCAGAGATTCAATGCGCAAAGCTGCCTTAGGAGATCGGAGAAGAAATCTGACTCCGTCGTCAACGTCGCGCGACGGCGATTACTTTTCCGCTGAAGCTGTTTATCACAACCCGCGCTTATTTTACCAGAGCTACTTGGAGATGGAGAAGATATTCAAGGTGTATGTATACCCAGACGGGGACCTACCAATTGTTCATGATGGCCCATGCAAGGACATATACGCCATTGAAGGAAGGTTCCTCCATGAAATTGAATACGGAGTTGGGAAACTTAGAACCAATGATCCTAATGCAGCTCACGTTTACTTTTTACCATTCAGTGTGACATGGATGGTCAAGTACTTCTATACACAACCCTCTTATGATCTCACTCCTTTAAAGCAGTTTGTCTCTGATTACGTGAATGTGATATCTATGAGACACCCCTTCTGGAACAGAACTCACGGTGCTGACCACTTCATGCTTGCTTGTCATGATTGGGGTCCATTTGCAGCAGAGGGCAATCGTTTTCTTTACAATACCTCAATCCGTGTCTTGTGCAATGCCAACACTTCTGAAGGTTTCAATCCTCTAAAAGATGTATCTTTACCAGAAATTTACCTATACGGAGGTGAAGTATCTCCTAAACTCCTTACACCTCCACCCGACACCGCCCCACGCAGGTATCTAGCCTTCTTCTCTGGCGGTTTGCACGGCCCAATTCGCCCGATTCTTCTCGAACACTGGAAAAACAAAGACAGCGATATAGCTGTGTATGAGTATCTCACTAAAGGCATGGACTACTATTCCTTCATGCTAAACTCTAAGTACTGCCTTTGTCCAAGTGGCCATGAAGTGGCTAGCCCAAGAATTGTGGAGTCAATTTATGCAGAATGTGTTCCTGTGATTCTATCGAATTTTTATGTGTTGCCCTTCAGTGATGTGCTGCGATGGGAGGCATTCTCAGTGCAGGTGGATGTTTCAGATATTCCTAGGTTGAAAGAGATTCTTAGTGGTATTCCAGAGAGCAAGTATAGGAAGCTCAAAAATGGAGTTAGGGCTGTGAGGAAACATTTTACTCTGAATCAACCTGCTAAAAGATTTGATGTTTTTCACATGATCTTACACTCAATATGGCTGAGGAGATTGAATTTAAAATTTGGATAG 1434 0.4351 MEIRYGKLFSPILILLLLASFVVIFIALPSNLTRFIVNLKPTFSISLQNLRTKVSGEDDILLAVEHAGDHSNSTLKSEVRKVIKSKEEKREEELARARDSMRKAALGDRRRNLTPSSTSRDGDYFSAEAVYHNPRLFYQSYLEMEKIFKVYVYPDGDLPIVHDGPCKDIYAIEGRFLHEIEYGVGKLRTNDPNAAHVYFLPFSVTWMVKYFYTQPSYDLTPLKQFVSDYVNVISMRHPFWNRTHGADHFMLACHDWGPFAAEGNRFLYNTSIRVLCNANTSEGFNPLKDVSLPEIYLYGGEVSPKLLTPPPDTAPRRYLAFFSGGLHGPIRPILLEHWKNKDSDIAVYEYLTKGMDYYSFMLNSKYCLCPSGHEVASPRIVESIYAECVPVILSNFYVLPFSDVLRWEAFSVQVDVSDIPRLKEILSGIPESKYRKLKNGVRAVRKHFTLNQPAKRFDVFHMILHSIWLRRLNLKFG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03974 477 MobiDBLite consensus disorder prediction 93 109 - -
Vifa2g03974 477 MobiDBLite consensus disorder prediction 93 119 - -
Vifa2g03974 477 Pfam Exostosin family 146 427 IPR040911 -
Vifa2g03974 477 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 28 467 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03974 Vifa-Chr2 1168493277 1168497078 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03974 - - gmx:100820065 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03974 2 1168493277 1168497078 Vifa2g03974 2 1168493277 1168497078 ECH