Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03970 ATGGATCATGATCACCCTTCCAAACACCGTATCATAACTCTCCTAAACTCCCTCAAAGAAGCTTCCAAAAATCTCCAAACCAAAACCAACCCTTTCACTTTCCTCTTCAAACCCGACTCCAAAACCGCCATTGAAGCTCTCCTAGAGCTCGAATCAAAAGCAACCATCATCTTCTCATCTCACCCAAATCTCCACAACCTCTCTCACTCCCTCACCACCCTCAAAACCTTAATCCAAAATCTCCAAAAATCCAAACCCCACGGACTTAAATCCATAATCCAACGCCAAATCATCGCATACAAGATTTCCCAAGCTTCCTCATCTCTAGAATCCGAAATTCAAATCTACTTAGACCGTGTCATCATCATAAACCTCGTTAAAGCACTTCAAGAAGAAGAAAACGAAGAAGAACAGCTTCAGGCTATTATCGAGTTTCAACAGAGATTATCCAAAGGTTTTGATTTGGAGTTTCAAGACTTGATTTTGAGAGCGAAAGTGTTTACCCTTTTGGAAACCACGTTGATTGAACGTTTTAACTCGAAAAGGGTTCGAGAAGAATCTGCTATGGCGATATCAGATTTGGTGAAATTCAACAAGAATGTGTTTGTTGGGTTAGTGTTGATGGGTCCAACGGTTAAAGCTTTGATATCGATGGCTTCTGAATGTTCTATAAAGGTTCTTTGTTTACTCGTTGGATTCATTCGAAGTCCTTTGGTTGATGAGATTTATTCCAACGGAGAGATTCCTAGTATTGTTGGGTTTTTGTTGTCGATAGATTTGTGTGTTTGTGTTGCGGGTTTGGATTGTGTTCTTGAGGTTGGTTATATTGGGAGAAGGGAAGTTATTGAAGCTATGATGGGGCAGAACTTGGTGAAGATATTAATGGATTTGCAAAGAAGAGAAAGTTGTGTTTTTGATGGTTGTGTTTCGAGATTTGCGATACAATTGGAAGTTGGAGAAGGTTTGAGTAGTGAAGAGAAAAGTGAGGCGAAATTGGAGATGTTGAGGTTGGTTAAGGAAGCTTCAAGATCAGATGCAGAGTTTGCTAGTGTTAGTGCTGAGATATTGTGGGGTTCTTCACCTTAG 1086 0.4024 MDHDHPSKHRIITLLNSLKEASKNLQTKTNPFTFLFKPDSKTAIEALLELESKATIIFSSHPNLHNLSHSLTTLKTLIQNLQKSKPHGLKSIIQRQIIAYKISQASSSLESEIQIYLDRVIIINLVKALQEEENEEEQLQAIIEFQQRLSKGFDLEFQDLILRAKVFTLLETTLIERFNSKRVREESAMAISDLVKFNKNVFVGLVLMGPTVKALISMASECSIKVLCLLVGFIRSPLVDEIYSNGEIPSIVGFLLSIDLCVCVAGLDCVLEVGYIGRREVIEAMMGQNLVKILMDLQRRESCVFDGCVSRFAIQLEVGEGLSSEEKSEAKLEMLRLVKEASRSDAEFASVSAEILWGSSP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03970 361 SUPERFAMILY ARM repeat 57 298 IPR016024 -
Vifa2g03970 361 Gene3D - 72 315 IPR011989 -
Vifa2g03970 361 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 302 361 - -
Vifa2g03970 361 Coils Coil 122 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03970 Vifa-Chr2 1167841415 1167842500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03970 - - lang:109326780 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03970 2 1167841415 1167842500 Vifa2g03970 2 1167841415 1167842500 ECH