Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03959 ATGCTTACTATTCACCGGCCACTTCATTTTTCTTTCCTTCTCACATTTTTCTTCTTATTCTTCCACTCACACTTCACTTCAGGGAAACAACACGATGCAAACGCTGTAACATTTTCTCGGTATGATGCACTTGCTGCTGAACCTGAACCTGAACCTGTACCGTATGGAAACTCACCACTTCCTTTAGCTGCTGAGAGAACCAGAAGAAAAGATCCTCTAGATGGCTTCAATGTCTACACAAATGGATGGAATATCAGTGACCACCATTATTGGGCTTCAGTGGCATATACGGCAGTTCCTGTATTCAGCATTGCAGCAATCTGGTTCATAGGCTTTGGCTTTTGTTTATTACTTCTCATTGTTTGTTACTTCTGTCGTAAAAACGAGCCTTATGGTTATTCTCCAACATGCTACACACTTTCTCTTATTCTTCTCATATTGCTCACAATTACAACAATGATTGGATGTGCGGTTCTTTATTTTGGCCAAGCTAAGCAGGTTGGAATCGACCGAGTTTTTCTCCCTGTGAATGTTCAAACTGATATTGATGAGGCAGAAACAGATATCAATGCTTCTGCTGTCACAATTTCTGATAAAACAAAGGAGAATTCAGACAACATTCAAGATCTATTAGATTCTGTGAGGATGGCGCTCATCATTATAACCGTGGTTATGCTTGTTTTGACGTTTCTTGGATTTCTGTTCTCAATTTTCGGAATGCAGGTCCTTGTGTATATCTTGGTAATCGCAGGATGGTTTCTTGTTACCGGCACCCTTATATTATGTGGCTTGTTCCTTATTCTCCACAATGTGACAGCGGATACATGTGTAGCCATGAATGAGTGGATCCAATATCCTACTGCGAATACAGCTCTAGATGACATTCTGCCCTGTGTGGACAACGCCACTGCTCAAGTAACTTTGTTAAGAAGCAAAGAAGTGACTTCTGAACTAGTAAACTTGGTGAATCAAGTTATTACCAATGTTTCTAACATCAACTTTGCGCCCAATTTCACGCCATTGTATTACAATCAATCTGGTCCCTTGATGCCACTTCTCTGCGATCCGTTTCATCCTGACATGACAGATAGACAATGTGACTCTGGTGAAGTGAACCTAAGCAATGCAACACAGGTATATGGAACTTCTGTGTGCCAGGTTTCACCGTCTGAGATATGCATGACTCAAGGGCGTTTAACCCCGACGTTCTATAACCAAATATCCGCCGGAATAAACGTTGGTAACGCATTATATACGTATGCACCTTCCCTTGTGGAGCTACAGGACTGCACATTCGTTCGAGAAACATTCACTGATATATACAATGATCATTGTCCTGGTCTACGACGTTACAGTAGATGGATTTATGTTGGATTAGTAATGGTCTCTTTTGCTGTGATGTTCTCATTGATCTGCTGGGTTGTGTATGGAAGAGAACGGAGACATCGTCTATATAGAAAAGAGTCTAAAAATTTAAGAATAACCACACCTGCACCAAGAAATGCACCTGCACCTGCACCAAGAAATGCACCTGCACCTGCACCAACAAATGCTCTGGCACTATATTCCTGA 1572 0.4148 MLTIHRPLHFSFLLTFFFLFFHSHFTSGKQHDANAVTFSRYDALAAEPEPEPVPYGNSPLPLAAERTRRKDPLDGFNVYTNGWNISDHHYWASVAYTAVPVFSIAAIWFIGFGFCLLLLIVCYFCRKNEPYGYSPTCYTLSLILLILLTITTMIGCAVLYFGQAKQVGIDRVFLPVNVQTDIDEAETDINASAVTISDKTKENSDNIQDLLDSVRMALIIITVVMLVLTFLGFLFSIFGMQVLVYILVIAGWFLVTGTLILCGLFLILHNVTADTCVAMNEWIQYPTANTALDDILPCVDNATAQVTLLRSKEVTSELVNLVNQVITNVSNINFAPNFTPLYYNQSGPLMPLLCDPFHPDMTDRQCDSGEVNLSNATQVYGTSVCQVSPSEICMTQGRLTPTFYNQISAGINVGNALYTYAPSLVELQDCTFVRETFTDIYNDHCPGLRRYSRWIYVGLVMVSFAVMFSLICWVVYGRERRHRLYRKESKNLRITTPAPRNAPAPAPRNAPAPAPTNALALYS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03959 523 MobiDBLite consensus disorder prediction 495 516 - -
Vifa2g03959 523 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 164 489 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03959 Vifa-Chr2 1165217908 1165220594 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03959 - - cam:101505453 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03959 2 1165217908 1165220594 Vifa2g03959 2 1165217908 1165220594 ECH