Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03957 ATGTATAAGGTAGCAAAAGCTTCCGAGTACCTTGTGATCACGGGAGTCGGAATCAAAGACATCAAACTTGCAAAAAAAGCATGGATTTTTCCCGGACAAACCTATACCGTCTTTGACCTTTCTCCGGTCAATTACACCTTCGAAGTTCAAGCTATGAGCGCCGAGAAACTCCCTTTCGTTCTCCCTGCCGTCTTCACAATAGGTCCTCGTGTCAATGATCGTGAAAGCCTCCTCAAATACGCCAAACTGATTTCACCACATGATAAGCTCTCTAATCATGTTAAAGAACTCGTTCAAGGAATCATCGAAGGCGAGACTCGTGTTCTCGCTGCTTCGATGACTATGGAAGAGGTCTTCAGAGGAACAAAAGAGTTTAAACAAGAAGTGTTCGAGAAAGTTCAGCTTGAACTTAACCAATTTGGATTACTGATTTACAATGCAAATGTGAAACAATTGGTTGATGTTCCAGGTCATGAATATTTCTCATATTTAGGGCAAAAGACACAAATGGAGGCAGCGAATCAAGCTAAAGTTGACGTGGCAGAAGCTACAATGAAAGGTGAGATTGGTTCGAAATTGAGGAAAGGACAAACGCTGCAGAATGCGGCAAAAATTGATGCAGAGACGAAGGTTATTGCGGTGCAAAGAAGTGCAGAGGGTGAAAAGGAAGGAATAAAAGTGAGAAGTGAGGTGAAGGTTTTTGAGAATGAGAGAGAAGCTGAAGTGGCTCAGGCAAATTCAGAGTTGGCTAAGAAGAAAGCGGCTTGGACTAAGGCGGCTCAAGTGGCTGAAGTTGAAGCTGCTAAAGCTGTGGCTCTTAGGGACGCTGAGTTGCAAGGGGAGGTGGAGAGGATGAATGCTTTGACAACAACTGAGAAGCTTAAAGCTGAGTTTCTTAGTAAAGCTAGTGTTCAATATGAAACCAAGGTACAAGAAGCAAACTGGGAGCTGTACAAGAAACAAAAAGAGGCAGAAGCAATTCTGTATGAGAAGAAGGCAGAGGCAGAAGCAGAGATTGCATTGGCAGACGCAACATTTTATGCTAAAAAGCAAGCAGCTGAAGCAGATCTATATGCAAAGAAAAAAGAGGCTGAGGGGATTGTGGCACTTGGACAGTCTCAAGGGGTGTATATAAGTACACTTCTTACTGCACTTGGAGGAAACTACACAGCACTAAGGGACTATTTGATGATAAATGGTGGCGTGTTTCAAGAGATTGCAAAGATTAATGCGGAGGCAATTCGTGGACTTGAGCCTAAGATTAGTATATGGAGCAATGGTGGTGATAATGGTGGGGGAATAACAGAAGGTGCAATGGGTATGAAAGAGCTTGCTGGTGTGTACAAGATGTTGCCACCTCTGTTCAAGACTGTTCATGAACAAACAGGAATGTTGCCTCCTTCTTGGATGGGAGCCTTACCTGACAAAAGCCCTTAG 1437 0.4356 MYKVAKASEYLVITGVGIKDIKLAKKAWIFPGQTYTVFDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRVNDRESLLKYAKLISPHDKLSNHVKELVQGIIEGETRVLAASMTMEEVFRGTKEFKQEVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEATMKGEIGSKLRKGQTLQNAAKIDAETKVIAVQRSAEGEKEGIKVRSEVKVFENEREAEVAQANSELAKKKAAWTKAAQVAEVEAAKAVALRDAELQGEVERMNALTTTEKLKAEFLSKASVQYETKVQEANWELYKKQKEAEAILYEKKAEAEAEIALADATFYAKKQAAEADLYAKKKEAEGIVALGQSQGVYISTLLTALGGNYTALRDYLMINGGVFQEIAKINAEAIRGLEPKISIWSNGGDNGGGITEGAMGMKELAGVYKMLPPLFKTVHEQTGMLPPSWMGALPDKSP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03957 478 PANTHER FLOTILLIN-RELATED 1 475 IPR027705 -
Vifa2g03957 478 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Vifa2g03957 478 Coils Coil 318 338 - -
Vifa2g03957 478 Gene3D Band 7 domain 38 155 IPR036013 -
Vifa2g03957 478 Pfam SPFH domain / Band 7 family 9 183 IPR001107 -
Vifa2g03957 478 CDD SPFH_flotillin 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03957 Vifa-Chr2 1164686441 1164688062 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03957 K07192 - aew:130787462 724.546