Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03916 ATGAGATTCACTGTGATAATTGTTCTCTTAACATTATTCAGTTTAAACAAACTTTCTGAGTCTAACTCATCTTGTAAAGCATGGCTGGTCCAATCCATCCCCACCGATATGCCTCACCTCTCCCATGTTCCCGGAGTCCTCTCCACCGGGGATGTGCTCCGGTGGCTGGCTGCAAACTCGACTAGTAGACTCGACGTAATTGCTCAGTATTGGCAATTACTAGCTTCACCGGACGATCCTCGCACGGGTGATTATGGTTATACTCGAGAACAGATGCACAAATTTGGTGCTCATGAAGGTGCTGCAGTTTATCAAGCATTGGATGATGCTGCAGACCGTAATGTTAGTATCAGGTTACTGTCTCATTCTGGAATTTATCCAACATTTAACTTAGAACCTTCCAAACTTGCTTCTGGAAGGCCAAATGTTAAGAATGTGACTTTGCTAATGAAGGATTGGTGGGGCTCTGGGATTGTCCATGCCAAAGTTTGGATATCTGATAATAGAGATGTGTATATTGGATCTGCAAACAATGATTGGAAATCTCTAACACAGGTCAAGGAAGTTGGAATTTATCTTGTTGGTTGTCATGGAATAGCTAAAAAGGTTGAAGTTTACTTTAACAATTTATGGAAACTAGCATCTCTCAATTCTTCAGCTTACACAAAAACAGTGATGGATCACCAATGGCAAGTTAAAAGAAAGGTTCCTTGTTGGTCACATTTCATCAAACGTAGAGAGAGGTGCAAGTCACCTCTTCCGCGATATGTGGAGACGGGTCATGTATCAGGATATCCTATTTTGGCCGACCCTTATATGTTTGAAGCCTCAACTCAAACTCCCGGGAGTAATTATTCAACAAAACTTCCCCAAGTCAATTATCTCTCCTTTGCTCCCCCAGAGCTATCATTTGGCAGTTATCAGAGTGATGAACAGGCATGGATTGATACAATTAAATCTGTTGGGATAAGAGAGACGGTTAGAATCAACACCATGGACTGGCTAGGTCAATCACAATATACAGACCAAACAATTTACTGGTCATCGCTATCGTCTGCAATATCCGAGGTTGTGTTTTCCAAGCATGCAACGGTAAAGATATTGGTGGCATACTGGGCACACTTCATCAATAGCACAGATGATTACTTGAAGTATCTTCACTACACCAACACTCTATGCTCTTCTTCAAAATACAACAAATGTTCTGGTAAAGTTGAGATCAAATATTACATGGTACCGGGTTTCAACGAGACAGGACCTGCATATCAGAATGGAAGTAGTACAGGAAACATATACCCTGATTTTACAAGAGTGAATCATGGAAAATATGTAGTTAGCAATGTAAGGGCACACATTGGGACAAGCAACCTTGTATGGGACTATTTCTATACAACAGCAGGTGTTAGCTTTGGGACATACAACACTGCCATTGTATCTCAACTTAGGGAAATTTTTGAGGCTGATTGGAACTCTCCCTATGCTGTTCCAATTCAAGAGCTGGAGAGAGAGTCTATATTTCTAGTTTCAAATAGATAA 1536 0.4102 MRFTVIIVLLTLFSLNKLSESNSSCKAWLVQSIPTDMPHLSHVPGVLSTGDVLRWLAANSTSRLDVIAQYWQLLASPDDPRTGDYGYTREQMHKFGAHEGAAVYQALDDAADRNVSIRLLSHSGIYPTFNLEPSKLASGRPNVKNVTLLMKDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKEVGIYLVGCHGIAKKVEVYFNNLWKLASLNSSAYTKTVMDHQWQVKRKVPCWSHFIKRRERCKSPLPRYVETGHVSGYPILADPYMFEASTQTPGSNYSTKLPQVNYLSFAPPELSFGSYQSDEQAWIDTIKSVGIRETVRINTMDWLGQSQYTDQTIYWSSLSSAISEVVFSKHATVKILVAYWAHFINSTDDYLKYLHYTNTLCSSSKYNKCSGKVEIKYYMVPGFNETGPAYQNGSSTGNIYPDFTRVNHGKYVVSNVRAHIGTSNLVWDYFYTTAGVSFGTYNTAIVSQLREIFEADWNSPYAVPIQELERESIFLVSNR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03916 511 Pfam PLD-like domain 101 211 IPR025202 -
Vifa2g03916 511 Gene3D Endonuclease Chain A 293 492 - -
Vifa2g03916 511 CDD PLDc_vPLD3_4_5_like_2 294 490 - -
Vifa2g03916 511 CDD PLDc_vPLD3_4_5_like_1 29 196 - -
Vifa2g03916 511 SMART pld_4 155 182 IPR001736 GO:0003824
Vifa2g03916 511 SMART pld_4 435 461 IPR001736 GO:0003824
Vifa2g03916 511 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 155 182 IPR001736 GO:0003824
Vifa2g03916 511 PANTHER PHOSPHOLIPASE D - RELATED 18 503 - -
Vifa2g03916 511 SUPERFAMILY Phospholipase D/nuclease 307 505 - -
Vifa2g03916 511 Gene3D Endonuclease Chain A 48 215 - -
Vifa2g03916 511 SUPERFAMILY Phospholipase D/nuclease 100 213 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03916 K16860 - gmx:100778897 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03916 2 1142158728 1142160904 Vifa2g03916 2 1142158728 1142160904 ECH