Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03909 ATGGAGATTACAACCCAGCAACTAAGCGCATACAACGGCACAGATCCATCGAAGCCGATATACGTCGCCGTGAAAGGTCGCGTGTTCGACGTCACCACCGGCAAATCGTTCTACGGCCCCGGCGGAGCCTACGCTATGTTCGCCGGCAGAGACGCGAGCAGAGCACTGGCGAAGATGAGCAAAAACGAAGAAGACATCACGTCGTCGCTGGATGGACTCACCGAGAAAGAGATCGGAGTTCTCAATGATTGGGAAACGAAGTTCGTCGCTAAGTACCCTGTTGTTGCAACGCTTGTTAATTAA 303 0.5281 MEITTQQLSAYNGTDPSKPIYVAVKGRVFDVTTGKSFYGPGGAYAMFAGRDASRALAKMSKNEEDITSSLDGLTEKEIGVLNDWETKFVAKYPVVATLVN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03909 100 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 2 99 - -
Vifa2g03909 100 SMART Cyt_b5_2 3 99 IPR001199 -
Vifa2g03909 100 Pfam Cytochrome b5-like Heme/Steroid binding domain 5 76 IPR001199 -
Vifa2g03909 100 FunFam membrane-associated progesterone receptor component 1 1 100 - -
Vifa2g03909 100 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 99 IPR036400 -
Vifa2g03909 100 Gene3D - 1 100 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03909 Vifa-Chr2 1141359275 1141359577 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03909 K17278 - gmx:100779765 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03909 2 1141359275 1141359577 Vifa2g03909 2 1141359275 1141359577 ECH