Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03904 ATGAAGATTGCAATCGAAGGATGCATGCATGGCGATCTCGACAATGTCTACAAAACCCTCCAACACCTCGAGAAATCCCACAACACCAAAATCGACCTCCTCCTCTGTTGCGGCGATTTCCAGTCCGTGCGTAACGAGCATGATTTGGACAGCCTAGCCGTACCGGAGAAATACCGAACCATGAATTCCTTCTGGAAATACTATTCTGGTTTGGCGGTTGCTCCGTATCCCACGATCTTCGTCGGTGGTAACCACGAAGCTTCCAATTACCTATGGGAACTGTATTATGGAGGATGGGCTGCACCTAACATATACTTTTTGGGAGCTGCTGGTGTGATTAAGTTTGGGAATATACGAATTGGGGGGATCTCTGGAATTTATAAGCATTTTGATTATAAATCAGGACACTATGAGAGGCCTCCTTATGATAAAAATACCATTAAGTCTGTGTTTCATGTTCGAGAATATGATGTCCGTAAACTCATGCAAGTTGAGGAACCCGTTGATATTTTTCTCTCACATGATTGGCCGGTGAACATCACTGATCATGGGGATTGTGAGGGGCTTCTACGGAGGAAGCCTTTCTTCAGAGAAGAGGTAGAGGGAAAAAGACTTGGGAGTAAAGCTGCTGCTCAACTTCTAGAAAAATTGAAACCGCAATTCTGGTTTTCGGCACACTTACACTGCAAGTTTGCTGCTCTTGTTCAGCACGGGGAAGGAGGTCCTGTGACAAAATTCCTAGCACTTGATAAATGTCTTCCTGGGCGTGATTTCTTACAGGTTGTTGAAATTGAATCAGAGGCAGGACCTTATGAGATTCAGTTTGATGAAGAATGGTTAGCAATAACACGATTGTTCAACAATGTATTCCCTTTGACTCCCAAAGGTGCAGATTTTCGAGGTGTAAATCTTGAGATGGAAGATTGTCGCAAATGGGTTAGAAGCAAGCTACAAGATTGGGGTTGTAAACCTTCTGAGTTTGTTAGAACAGTTCCATGTTATGATCCTTCTCAAGCCGGTGTTGAAGGTACTTCTGCAGTCAATCCTCGGAATCCTCAGACAGAATATCTTTTGCGACTTCTGGAACTTCCATATCTTCTTGATAGAAATCCTGAAGCAAAGGACATGTCACCTTATCCTTCTTTAATTCCAAGAGGTCCTGGTGGTGATTATAGCGAGGACATCCCCATTGATGATGTGGATGATGACGATGACGACGATGAGGGCCTCCCACCAGCTGAAGAGGTGGAAACTGAGACTTGA 1263 0.4418 MKIAIEGCMHGDLDNVYKTLQHLEKSHNTKIDLLLCCGDFQSVRNEHDLDSLAVPEKYRTMNSFWKYYSGLAVAPYPTIFVGGNHEASNYLWELYYGGWAAPNIYFLGAAGVIKFGNIRIGGISGIYKHFDYKSGHYERPPYDKNTIKSVFHVREYDVRKLMQVEEPVDIFLSHDWPVNITDHGDCEGLLRRKPFFREEVEGKRLGSKAAAQLLEKLKPQFWFSAHLHCKFAALVQHGEGGPVTKFLALDKCLPGRDFLQVVEIESEAGPYEIQFDEEWLAITRLFNNVFPLTPKGADFRGVNLEMEDCRKWVRSKLQDWGCKPSEFVRTVPCYDPSQAGVEGTSAVNPRNPQTEYLLRLLELPYLLDRNPEAKDMSPYPSLIPRGPGGDYSEDIPIDDVDDDDDDDEGLPPAEEVETET 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03904 420 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Vifa2g03904 420 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 406 - -
Vifa2g03904 420 FunFam Lariat debranching enzyme 9 251 - -
Vifa2g03904 420 CDD MPP_Dbr1_N 3 259 IPR041816 -
Vifa2g03904 420 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Vifa2g03904 420 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Vifa2g03904 420 MobiDBLite consensus disorder prediction 394 420 - -
Vifa2g03904 420 MobiDBLite consensus disorder prediction 372 420 - -
Vifa2g03904 420 Gene3D - 4 235 IPR029052 -
Vifa2g03904 420 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03904 K18328 - gmx:100812726 697.582