Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03899 ATGAGGAGGAATGCCTTCGCCGCTCTCTACCGTCACACCGGCTCCATTTCTATCTCCGCAAAGTTACGACATGAGAGTGCAACTGAGATTATATTAGGCAAATGCATACCGCTTGAATATCTGAGAAAGTTGAATTCCTGTTCTCCTTCTTGGCTGTTGCATCAAAATTCATATTCTACTGGTTTCACGAGCGTTCACGGTGAAACGCCGTCTCCTGATTATGCAAGGAGGAGGAGGGAATCGCTGGAAGATAAGTTTGGGCTTGCTCTTGGAACTTACAGCTCTAAAAGTTTCAATGCTATATACCGGTTTGGTCCCTTTTTGGCTTTGTACAGGGCTGCGATTATTTCATTTCATGTGTTCAGGCTAACTATGTGGCAGTTGTTCCTTCAAGACATACAAAAACGAGCGGTTAAGTTTCGTGAAACTCTAATACGCTTGGGTCCTTTCTACATTAAGCTCGGGCAGGCATTGAGCACTAGACCTGACATATTACCAACTGTATACTGTCAAGAACTTGCTAAGCTACAGGATCAAATACCTCCATTTCCAACTGATGTTGCTATCAGATCTATTGAAACCCAGTTTGGTGCTCCTATTGATGACATTTTTAGTGACATTAGCCCAGCACCTATTGCAGCAGCATCGTTAGGGCAGGTTTATAAAGCTCACCTGCATTCTGGAGAACTTGTAGCTGTTAAAGTTCAGAGGCCAGGCATGTCACTTTCGTTGACCCTTGATGCTTTGCTATTCCATATGATTGGGGGCCAATTTAAGCGGTTTGCAAAGGCTCGCAAAGATCTTCTAGTAGCAGTTAATGAAATGGTAAGGCACATGTTTGATGAAATTGATTATGTCCTAGAGGGGAAAAACGCTGAGCGATTTGCTTCTCTCTACTGTGCGTCTTCAAGCGGAGGTAGTATAAAAAACAATAGAACAAAGTCAATCAGAGCTCCCAAAATATACTGGGACTATACATGCACTACTATACTGACTATGGAGTGGTTGGATGGAATTAAGCTTACAGATGAAACAGGCTTGAGTAAAGCTTCTTTGAACAGAAGGGAACTCATTGACCAGGGATTATATTGCTCTCTGAGACAAATGCTTGAGGACGGTTACTTTCATGCTGATCCTCATCCGGGAAACCTTGTTGCGACAAATGATGGATCACTTGCATATTTTGACTTTGGAATGATGGGGGATATTCCTAGGCATTATCGTATTGGACTTATTCAAATGATTGTGCACTTTGTTAATCGCGACTCTCTGAGCTTGGCAAATGACTTCCTTTCTTTGGGATTTATTCCTGAAGGGGTTGATATACTTTTAGTTTCTGATGCACTGCAAGCATCCTTTTCCGACAGGAGTCATCGGACTAGTGAATCTCAAGATTTTCAGGGAATCATGAACCAACTATATGCTATCATGTATGAATTTAACTTCTCCCTCCCACCAGACTATGCTCTGGTTATAAGAGCACTGGGATCACTAGAAGGGACAGCTAAAGCTCTGGATCCTGATTTTAAGGTCATTGAGAGTGCATATCCTTTTGTTATTGGGAGACTTATAGCAGACCCAAGTCCTGATATGAGAAGAATTTTGAGGGAACTTGTCATTCGTAACAATGGTTCCATAAGATGGAATCGGTTAGAGCGCCTGGTAGCAGCAATATCTGAACAAGCCTCAGAGCTAACTGGAGACCCTAATCCTGAAAAGATCTCAAATCCTTCAGTTTGGAAATTATTTGACATGCATGCCGTCGTTGATTCAACTGAAGATCTTTTATTATTCATATTATCAGAGAAGGGTCACAGAGTGCGTCTTTTCCTTCTTCGGGATATAGTAGAAGCAGCTGATGTGTTTCTACAAGATGAATTGATTGACTGTGCATTAAATGGGAAGCCTCAGGACCCGAGGATATTTCTCTTTGAGGAGCGTACTATCCTCGCTAGGATTGAAAAAGGCTTTCAATACATTCAAGATGTGGTGAAGTTGGCGCCAGGGGAATGGACAGTAATGCTTATTCGAATGGCAGTGAAGCCCGAGGTTCACAAATTTGCTTTAGACATTATTTCAGCTTTAGCTTTGCGTTCTAGTCATAGATTGAAGGTAGCTTATTGGCTCTATTTATCGATACTTCTACACAAATTATCAGACTAA 2163 0.4184 MRRNAFAALYRHTGSISISAKLRHESATEIILGKCIPLEYLRKLNSCSPSWLLHQNSYSTGFTSVHGETPSPDYARRRRESLEDKFGLALGTYSSKSFNAIYRFGPFLALYRAAIISFHVFRLTMWQLFLQDIQKRAVKFRETLIRLGPFYIKLGQALSTRPDILPTVYCQELAKLQDQIPPFPTDVAIRSIETQFGAPIDDIFSDISPAPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQFKRFAKARKDLLVAVNEMVRHMFDEIDYVLEGKNAERFASLYCASSSGGSIKNNRTKSIRAPKIYWDYTCTTILTMEWLDGIKLTDETGLSKASLNRRELIDQGLYCSLRQMLEDGYFHADPHPGNLVATNDGSLAYFDFGMMGDIPRHYRIGLIQMIVHFVNRDSLSLANDFLSLGFIPEGVDILLVSDALQASFSDRSHRTSESQDFQGIMNQLYAIMYEFNFSLPPDYALVIRALGSLEGTAKALDPDFKVIESAYPFVIGRLIADPSPDMRRILRELVIRNNGSIRWNRLERLVAAISEQASELTGDPNPEKISNPSVWKLFDMHAVVDSTEDLLLFILSEKGHRVRLFLLRDIVEAADVFLQDELIDCALNGKPQDPRIFLFEERTILARIEKGFQYIQDVVKLAPGEWTVMLIRMAVKPEVHKFALDIISALALRSSHRLKVAYWLYLSILLHKLSD 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03899 720 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 83 703 - -
Vifa2g03899 720 SUPERFAMILY Protein kinase-like (PK-like) 177 420 IPR011009 -
Vifa2g03899 720 CDD ABC1_ADCK3-like 175 430 - -
Vifa2g03899 720 Pfam ABC1 atypical kinase-like domain 175 427 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03899 Vifa-Chr2 1139636686 1139647197 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03899 K08869 - gmx:100811652 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03899 2 1139636686 1139647197 Vifa2g03899 2 1139636686 1139647197 ECH