Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03859 ATGCTTCCATCCTTTGTGAGCTTCTCCGGCTTATACAGCGGCTACCTCCGTCGCTGTTTCACCGGCTCCGGTCTCTTCTCTCAAAAAATAGATATCGACAACGAAACATCTCTCCACGTTTGGGGACCAACAGATCAATCCACACACAAACAATCTCTAGTTCTGATTCACGGATTCGGTCCTACAGCCATATGGCAATGGCGTCAACAAGTTCAATTTCTAGCTCCACATTTCAATCTCTACGTTCCCGATCTAATTTTCTTCGGCGAATCAACAACGAGATCGGAGAAAAGATGCGAGCAATTTCAAGCCGCATCGGTTGCGAAACTGTTGGAGAAATTAGGGTTGAAGAAGTGCCACGTGGCAGGGACGAGTTATGGCGGTATTGTTGCTTATAATTTGGCGAAAATCTTAGGGGAAGACAAGATTGAAAAAGTGGTTATTTGTAGCTCTGGTGTTAATATGACGAAGAATCATAACGTCAAGTTGTTGGAAAGAGCTGGAGTGGAGAAAATTGAGGACCTTATGTTGCCTACGTCTCCGCAAAGTTTGAGGAAATTGATGACACTTGCTGTGGCCAAAAGAATCGCTTTCATGCCTGATTTTCTCTTGAATGACTTCTTAAATAAATTATACACGGAAAATAGGAAGGAAAAGATGGAGCTTCTACGTGGCCTGTCCCTCGGAAAGATTGATACGTCAAACATTTCACCTCTTCAACAGGAAGTTCTCATAATCTGGGGTGAAGATGACAAAATATTTCCTGTGCAGATGGCCCATGAACTGAAAGAGGTAATCAGTAAAAAGGCAAGAATAGAGTTGATAAAGGAGGCATCCCATGTGCCTCAAACTGAAAAGCCAGAGGAATTCAACAATATTATTTTAAATTTCTTACGTTCAAGCTCTTAA 909 0.4224 MLPSFVSFSGLYSGYLRRCFTGSGLFSQKIDIDNETSLHVWGPTDQSTHKQSLVLIHGFGPTAIWQWRQQVQFLAPHFNLYVPDLIFFGESTTRSEKRCEQFQAASVAKLLEKLGLKKCHVAGTSYGGIVAYNLAKILGEDKIEKVVICSSGVNMTKNHNVKLLERAGVEKIEDLMLPTSPQSLRKLMTLAVAKRIAFMPDFLLNDFLNKLYTENRKEKMELLRGLSLGKIDTSNISPLQQEVLIIWGEDDKIFPVQMAHELKEVISKKARIELIKEASHVPQTEKPEEFNNIILNFLRSSS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03859 302 SUPERFAMILY alpha/beta-Hydrolases 35 299 IPR029058 -
Vifa2g03859 302 Gene3D alpha/beta hydrolase 26 299 IPR029058 -
Vifa2g03859 302 PANTHER SI:DKEY-122A22.2 11 300 - -
Vifa2g03859 302 Pfam alpha/beta hydrolase fold 52 286 IPR000073 -
Vifa2g03859 302 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Vifa2g03859 302 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Vifa2g03859 302 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03859 Vifa-Chr2 1126265119 1126273358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03859 243 298 Acyl Lipid Metabolism Gene Families AT3G10840 42.857 8.76e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03859 - - lja:Lj1g3v1788330.1 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03859 2 1126265119 1126273358 Vifa2g03859 2 1126265119 1126273358 ECH