Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03816 ATGGCCTTGTCCTCTACCACTACATCATCATGCATTCCATTTCCAACTAACAACATTCTTCCACCCTATTTTAGATTCCAAACTAACCTTCTTTTTCCTCTCAATTTCCCACCCAGATTACGCATAAGAAGCTCCAGTGAAAACTCTGCGGGAGCTACAGAGGTAGATTCGGAGAGTTCTATTGAACTTCCAAAGGAATCATCCTCTTTAATTTCTACTCTCAATGTAGAAAGAGCTCTTCGTGGTATACCAATTACAGATGCAGATCACTATGGTAGACTCGGCATACCAAGAGGATGCTCCTATGACATGGTGCCAGTTGCGTATAACAACAAGGTTCGAGAAATCGAGAGTCAAGGTTTAGAGAAAGACATACTCAACAAGAAATTGGAACTTCTCAGAGAATCATACACCATCATGTCATCGCCAGATGAAAGAAGAATGTATGACTGGAGTTTGGCCAGAGAAGGTAACACAGAAAAATTTATTTGGCCATATGAGGTTGATGTCCCAGAGATTCCAAAAGGAGATCCTCCACCACAGGAACCTGAGGATGTTGGACCAACCAGACTGATTGGATACTTCCTAGTGGGATGGATTGTGCTAGCATTTGTGTTATCAATTGGACTAAACTTATAG 639 0.4163 MALSSTTTSSCIPFPTNNILPPYFRFQTNLLFPLNFPPRLRIRSSSENSAGATEVDSESSIELPKESSSLISTLNVERALRGIPITDADHYGRLGIPRGCSYDMVPVAYNNKVREIESQGLEKDILNKKLELLRESYTIMSSPDERRMYDWSLAREGNTEKFIWPYEVDVPEIPKGDPPPQEPEDVGPTRLIGYFLVGWIVLAFVLSIGLNL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03816 212 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 71 162 - -
Vifa2g03816 212 Gene3D DnaJ domain 84 162 IPR036869 -
Vifa2g03816 212 SUPERFAMILY Chaperone J-domain 82 153 IPR036869 -
Vifa2g03816 212 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 3 211 IPR044199 GO:0009535|GO:0010598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03816 K23052 - gmx:100793741 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03816 2 1120395773 1120396682 Vifa2g03816 2 1120395773 1120396682 ECH