Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03815 ATGGCTTCTGCATCTGTTGCAACAGCTCTACCACTTTGTTCTTCAACCCAAAACAAGCTGAAAAATCCATCCTCCGAATCCCTTTTCAGGCCACTACCATTAACACAACCAAAGAGAACCACACAGTCAAAATCTAAGTTTGTAATCAACGCATCTTTGAAAGAGAAGGCAGTGACAGCACTTACAGCTGCATCCTTGACAGCTTCCATGGTTATACCTGATGTGGCTTATGCAGCTGGATCTGATCTCTCACCTTCTCTCCAGAACTTTCTGCTAAGCATTTTTGCTGGTGGAGCTGTGCTAACAGCTATTTTTGGAGCTGTTATTGGAGTTTCCAACTTTGATCCTGTTAAAAGAGCTTAA 363 0.427 MASASVATALPLCSSTQNKLKNPSSESLFRPLPLTQPKRTTQSKSKFVINASLKEKAVTALTAASLTASMVIPDVAYAAGSDLSPSLQNFLLSIFAGGAVLTAIFGAVIGVSNFDPVKRA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03815 120 PANTHER OS07G0673550 PROTEIN 1 119 - -
Vifa2g03815 120 MobiDBLite consensus disorder prediction 17 42 - -
Vifa2g03815 120 FunFam Photosystem II psbX protein 82 120 - -
Vifa2g03815 120 Gene3D Single helix bin 83 120 - -
Vifa2g03815 120 Pfam Photosystem II reaction centre X protein (PsbX) 84 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03815 Vifa-Chr2 1118393706 1118394068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03815 - - aprc:113864756 155.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03815 2 1118393706 1118394068 Vifa2g03815 2 1118393706 1118394068 ECH